| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1731 |
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| Symbol | |
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| ID | 1220569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1852043 |
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| End bp | 1852861 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238123 |
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| Product | transmembrane ABC transporter protein |
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| Protein accession | NP_519852 |
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| Protein GI | 17546450 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0271867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCC CGCACACCTC GCTCATCGAG CGCATCTGGT ACTTCGCGCT GCGCGGCCTG
GCCGTGCTGA CGCTGCTCTA CCTGGTGCTG CCGGTGCTGG TGATCGTGCC GCTGTCGTTC
TCGTCGAGCA CCTTCCTCGC CTACCCGATC CCCAGCTACT CGCTGCGCTG GTACCAGAAC
CTGGTCAGCT CCGAAGAATG GCGCATGGCC GCCAAGAACA GCTTCATCGT GGCGCCCGCC
GCCACGCTGG TAGCGACCGT GTTCGGCACG CTGGCCGCCA TCGGCCTGAA CAAGGCGGAA
TTCCGCGGCA AGGCGCTGCT GATGGCGATC CTGGTCTCGC CGATGATCGT GCCGGTGGTG
GTGGTCGGGG TCGGCATGTA CCTGTTCTTC GCGCCGCTCG GGCTGGCCAA CACCTACACC
GGCCTGATCC TGGCGCACGC GGCGCTCGGC GTGCCCTTCG TGGTGACGAC GGTGCTGGCG
ACGCTGCAGG GCTTCAACCA CAACCTCGTG CGCGCCAGCC TGTCGCTGGG CGCCAACCCG
GTCATGACGT TCTTCCGCAT CACCCTGCCG GTGATCGCGC CGGGCGTGAT TTCCGGGGCG
CTGTTCGCTT TCGCGACCTC GTTCGACGAA GTGGTGGTCA CACTGTTCCT CGCCGGCGCC
GACCAGGTCA CGCTGCCGCG CCAGATGTTC ACCGGCATCC GCGAGAACAT CTCGCCGACC
ATCGCCGCGC TCGCCACCAT CCTGATCGTG TTCTCCACCT GCCTGCTGCT GACCTTCGAA
TGGCTGCGCG GCCGGGCCGC GGCCAAGGCG GTGGCCTGA
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| Protein sequence | MFAPHTSLIE RIWYFALRGL AVLTLLYLVL PVLVIVPLSF SSSTFLAYPI PSYSLRWYQN
LVSSEEWRMA AKNSFIVAPA ATLVATVFGT LAAIGLNKAE FRGKALLMAI LVSPMIVPVV
VVGVGMYLFF APLGLANTYT GLILAHAALG VPFVVTTVLA TLQGFNHNLV RASLSLGANP
VMTFFRITLP VIAPGVISGA LFAFATSFDE VVVTLFLAGA DQVTLPRQMF TGIRENISPT
IAALATILIV FSTCLLLTFE WLRGRAAAKA VA
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