| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_6091 |
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| Symbol | |
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| ID | 7380744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 1112921 |
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| End bp | 1113721 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649587 |
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| Product | ABC transporter membrane spanning protein (polyamine) |
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| Protein accession | YP_002547812 |
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| Protein GI | 222107021 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.417915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTGA ATTTCAACAG CCTTGGCACC TGGAAATGGA TTTTGCTGGT CATCACGCTG
CTGACGGCGG CGTTTCTCCT GTTGCCAATC CTGTTTATCG CCGCCTTGTC CTTCGGCTCC
TCGCAATGGC TGATTTTTCC GCCACCGGCC TGGACCACAA AATGGTATGG CCAGCTGTTT
GCCGATCCGC GCTGGCTGGA TGCCGCCTGG ACCAGCTTTC GCATCGCTGT CATCGTCAGC
ATCCTGTCGG TGCTCATTGG GCTTTATGCG TCGTTCGGCC TGGTGCGCGG ACGGTTTCTG
GGGCGGGACG CGCTGCGAGC ACTGTTCATG ACGCCGATGA TCCTGCCCGT TGTGGTGCTG
GCCGTGGCGC TCTATGCGTT TTTCCTGCGC ATCGGTCTGA ACGGCACGAC ACTCGGTTTC
GTCATTGCCC ATTTGGTTGT CGCACTGCCA TTCTCTATTC TGGCGCTGAC CAACGCGCTG
GAAGGTTTTG ACAAATCTAT CGAGGATGCG GCGGTGCTGT GCGGTGCCTC GCCGCTGAAG
GCGCGGCTGT TGATCACGCT GCCCTGCATC GGCCACGGCT TGTTTTCGGC GGCGGTGTTT
TCATTCCTGA CCTCCTGGGA TGAGGTCGTT CTGGCGATTT TCATGGCAAG CCCGACCCTA
CAAACGCTGC CGGTGAAGAT CTGGGCAACG CTGCGTCAGG ATCTGACACC GGTGATTGCC
GCGGCCTCCA CCCTTCTGAT CGTCGTCACC ATCGCGTTGA TGCTGATCAC CGCCCTGGTG
CGCAAAGGAC TGAAAGCATG A
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| Protein sequence | MLLNFNSLGT WKWILLVITL LTAAFLLLPI LFIAALSFGS SQWLIFPPPA WTTKWYGQLF
ADPRWLDAAW TSFRIAVIVS ILSVLIGLYA SFGLVRGRFL GRDALRALFM TPMILPVVVL
AVALYAFFLR IGLNGTTLGF VIAHLVVALP FSILALTNAL EGFDKSIEDA AVLCGASPLK
ARLLITLPCI GHGLFSAAVF SFLTSWDEVV LAIFMASPTL QTLPVKIWAT LRQDLTPVIA
AASTLLIVVT IALMLITALV RKGLKA
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