Gene Pnap_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2634 
Symbol 
ID4689802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2775206 
End bp2776033 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID639835641 
ProductFis family transcriptional regulator 
Protein accessionYP_982857 
Protein GI121605528 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTT CTGCTGTTCC CATTTTTCCT GCCTACTACA CCCCGGCCGA CAAGCTCGGC 
TGGTACGGCC TGCGCGTGTT CTGCGGCGCG GTGCTGCTGT TCTTGCTGCT GCCCATCCTG
GTCATCATCC CGCTGTCGTT CAGCAACTCG TCCTTTTTGT CCTACCCGAT TCCGGGCTGG
TCGCTGCGCT GGTACGAGGA ACTGTTCGCC TCCAGCGACT GGGCGCGGGC CACGCGCAAC
AGCTTCATCG TGGCGCCGCT CGCCACGCTG ATTGCGACGG CACTGGGCAC GCTGGCCGCT
GTCGGCCTGG CGCGGGTGCA GTTCTTCGGC AAGGGCCTGC TGACCAGCCT GCTGATCGCG
CCCATGGTGG TGCCTATCGT GGTGGTGGGC GTCAGCACCT ACTTGTTCTT TGCCAAAATC
GGCCTGTCCG ACTCCTACAC CGGGCTGGTG CTGGTGCATG CCGCGCTGGG CGCGCCGTTT
GTCGTCACCA CCGTCATGGC GACGCTGCAA GGCTTCAACC AGAACCTGGT CAAGGCCAGC
CTGAGCCTGG GCGCCGGGCC GCTGCAGACC TTTTTCCGGG TCACGCTGCC GGTGATTGCC
CCCGGCGTGA TCTCAGGCGC GCTGTTTGCC TTTGCCACTT CCTTTGATGA GGTGGTGGTC
ACCCTGTTCC TGGCCGGCCC GACGCAGACG ACGCTGCCGC GCCAGATGTT CACCGGCATC
CGGGAAAACA TTTCCCCGAC GATTGCCGCC GTGGCGACCC TGCTCATCCT GTTCACGGCA
CTGCTGATGA TGACCATGGA ATGGCTGCGC GGACGCGTCA AGAAGTAA
 
Protein sequence
MKLSAVPIFP AYYTPADKLG WYGLRVFCGA VLLFLLLPIL VIIPLSFSNS SFLSYPIPGW 
SLRWYEELFA SSDWARATRN SFIVAPLATL IATALGTLAA VGLARVQFFG KGLLTSLLIA
PMVVPIVVVG VSTYLFFAKI GLSDSYTGLV LVHAALGAPF VVTTVMATLQ GFNQNLVKAS
LSLGAGPLQT FFRVTLPVIA PGVISGALFA FATSFDEVVV TLFLAGPTQT TLPRQMFTGI
RENISPTIAA VATLLILFTA LLMMTMEWLR GRVKK