Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0469 |
Symbol | |
ID | 4580040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 439692 |
End bp | 440477 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639767785 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_914277 |
Protein GI | 119383221 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAGTTT CTGGTCTTTC TTCGATTGTT CTGGCGGCTC TGTGCATCCT TCTGATCGGT TTCCTGCTCG CTCCTCTGGC AATCATTCTG GTTTTGTCCT TCACCGCAGA CACCTATTTC GTCTTTCCGC CTTCCGGCTG GTCGCTGAAA TGGTATGCTG AAGTGATGGC CAGCGCGGAA TGGCGCAGAT CTTTCGTCAA TTCGATGCTT ATCGCAACTG CGACCGCTCT GTTGGCGACG GTGTTTGGCA CAATGGCGGC GTTGGGACTG TGGAAGCTAC GATCACCGCT CAAGGGTGTA ATCTACGCCA CGCTTCTGGC ACCCTCGATG GTGCCGATCG TCATCACTGC GGTCGCGCTG TTCGCAGCCT TCAGCAGGGT CGGTCTCGTG AATACTTACA GCGGGATAAT CATTGGCCAC ACTCTGCTGG CGTTGCCCTT CGTTATCCTG TCGGTTGGTG CAGCCCTGCA ATCCTATAAT CCTAATCTCG GCCGTGCCGC AGCAAGCTTG GGAGGTTCGC CGTTGCGGGT GTTCCTGGGC GTCATGATGC CCGTTATCGC GCCGGGATTG ATCACGGGGG CGCTGCTTGC TTTCTCGACA TCTTTCGATG AGGTCGTTCT GGCGTTGTTT CTCGCGTCGC CGGGACAAAG GACCGTTCCG CGCCAGATCT ATGCGGGAAT CGGGGAAAGT ATCACACCTG CTGTTGCCGC TGCCGCCGCA CTGGTGATCC TGATGGCGAC GATCCTTATG CTTCTGATTG TTTATCGAAG CCGAACCAGG ACATGA
|
Protein sequence | MRVSGLSSIV LAALCILLIG FLLAPLAIIL VLSFTADTYF VFPPSGWSLK WYAEVMASAE WRRSFVNSML IATATALLAT VFGTMAALGL WKLRSPLKGV IYATLLAPSM VPIVITAVAL FAAFSRVGLV NTYSGIIIGH TLLALPFVIL SVGAALQSYN PNLGRAAASL GGSPLRVFLG VMMPVIAPGL ITGALLAFST SFDEVVLALF LASPGQRTVP RQIYAGIGES ITPAVAAAAA LVILMATILM LLIVYRSRTR T
|
| |