More than 300 homologs were found in PanDaTox collection
for query gene Acry_1425 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009484  Acry_1425  short-chain dehydrogenase/reductase SDR  100 
 
 
236 aa  467  1.0000000000000001e-131  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4178  short-chain dehydrogenase/reductase SDR  71.43 
 
 
233 aa  308  2.9999999999999997e-83  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.585089  normal  0.589272 
 
 
-
 
NC_010725  Mpop_4325  short-chain dehydrogenase/reductase SDR  71 
 
 
233 aa  304  6e-82  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal 
 
 
-
 
NC_010172  Mext_3869  short-chain dehydrogenase/reductase SDR  70.56 
 
 
233 aa  304  6e-82  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0675753 
 
 
-
 
NC_007413  Ava_4758  Short-chain dehydrogenase/reductase SDR  68.89 
 
 
229 aa  304  8.000000000000001e-82  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000972291  normal 
 
 
-
 
NC_009485  BBta_7134  putative 3-oxoacyl-(acyl-carrier-protein) reductase  66.96 
 
 
233 aa  299  3e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.269687  normal 
 
 
-
 
NC_010505  Mrad2831_0073  short-chain dehydrogenase/reductase SDR  70.26 
 
 
234 aa  287  9e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.623849  normal 
 
 
-
 
NC_011369  Rleg2_0211  short-chain dehydrogenase/reductase SDR  62.72 
 
 
233 aa  282  3.0000000000000004e-75  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5693  short-chain dehydrogenase/reductase SDR  62.17 
 
 
232 aa  276  2e-73  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.406883 
 
 
-
 
NC_012850  Rleg_0240  short-chain dehydrogenase/reductase SDR  64.04 
 
 
233 aa  272  3e-72  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.377738  normal 
 
 
-
 
NC_010581  Bind_3591  short-chain dehydrogenase/reductase SDR  56.58 
 
 
233 aa  259  3e-68  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.286182  normal 
 
 
-
 
NC_009720  Xaut_4300  short-chain dehydrogenase/reductase SDR  58.41 
 
 
231 aa  244  6e-64  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_01430  putative short chain dehydrogenase  45.11 
 
 
242 aa  188  5.999999999999999e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0192  putative short chain dehydrogenase  45.11 
 
 
242 aa  186  2e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010815  Glov_3712  short-chain dehydrogenase/reductase SDR  43.67 
 
 
244 aa  184  9e-46  Geobacter lovleyi SZ  Bacteria  normal  normal  0.0912876 
 
 
-
 
NC_009719  Plav_3651  short-chain dehydrogenase/reductase SDR  43.22 
 
 
242 aa  181  7e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.100527  hitchhiker  0.00000000000000573842 
 
 
-
 
NC_007348  Reut_B4725  Short-chain dehydrogenase/reductase SDR  44.53 
 
 
246 aa  179  2.9999999999999997e-44  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0817  short-chain dehydrogenase/reductase SDR  42.62 
 
 
270 aa  177  2e-43  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4197  short-chain dehydrogenase/reductase SDR  39.84 
 
 
298 aa  176  2e-43  Cupriavidus metallidurans CH34  Bacteria  normal  0.18326  normal 
 
 
-
 
NC_007336  Reut_C6063  Short-chain dehydrogenase/reductase SDR  40.83 
 
 
244 aa  175  6e-43  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5357  short-chain dehydrogenase/reductase SDR  40.56 
 
 
242 aa  169  3e-41  Delftia acidovorans SPH-1  Bacteria  normal  0.735069  normal 
 
 
-
 
NC_013743  Htur_2193  short-chain dehydrogenase/reductase SDR  43.72 
 
 
233 aa  169  5e-41  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007336  Reut_C6052  Short-chain dehydrogenase/reductase SDR  43.22 
 
 
244 aa  168  6e-41  Ralstonia eutropha JMP134  Bacteria  normal  0.110774  n/a   
 
 
-
 
NC_008148  Rxyl_3013  short-chain dehydrogenase/reductase SDR  43.1 
 
 
236 aa  166  2.9999999999999998e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2625  short-chain dehydrogenase/reductase SDR  44.07 
 
 
243 aa  164  8e-40  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.720898 
 
 
-
 
NC_011004  Rpal_0022  short-chain dehydrogenase/reductase SDR  38.52 
 
 
245 aa  160  1e-38  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010335  Caul_5258  short-chain dehydrogenase/reductase SDR  40.59 
 
 
247 aa  160  1e-38  Caulobacter sp. K31  Bacteria  normal  hitchhiker  0.000237685 
 
 
-
 
NC_009485  BBta_0314  putative acetoin(diacetyl) reductase  39.08 
 
 
245 aa  160  2e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.417582  normal  0.615312 
 
 
-
 
NC_009485  BBta_5150  putative short-chain dehydrogenase/reductase SDR  39.08 
 
 
245 aa  160  2e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.855408  normal  0.11304 
 
 
-
 
NC_008048  Sala_0501  short-chain dehydrogenase/reductase SDR  45.38 
 
 
243 aa  160  2e-38  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.824433 
 
 
-
 
NC_010322  PputGB1_2901  short-chain dehydrogenase/reductase SDR  40.32 
 
 
243 aa  159  5e-38  Pseudomonas putida GB-1  Bacteria  normal  0.997812  normal 
 
 
-
 
NC_002947  PP_2881  short chain dehydrogenase/reductase family oxidoreductase  41.53 
 
 
243 aa  158  8e-38  Pseudomonas putida KT2440  Bacteria  normal  0.959841  normal  0.948307 
 
 
-
 
NC_007925  RPC_0017  short-chain dehydrogenase/reductase SDR  37.97 
 
 
245 aa  157  1e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2385  short-chain dehydrogenase/reductase SDR  41.53 
 
 
243 aa  157  1e-37  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3907  Short-chain dehydrogenase/reductase SDR  40.08 
 
 
242 aa  157  2e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.180445  normal 
 
 
-
 
NC_012792  Vapar_5354  short-chain dehydrogenase/reductase SDR  40.76 
 
 
246 aa  155  3e-37  Variovorax paradoxus S110  Bacteria  normal  0.495414  n/a   
 
 
-
 
NC_009512  Pput_2809  short-chain dehydrogenase/reductase SDR  40.68 
 
 
243 aa  156  3e-37  Pseudomonas putida F1  Bacteria  normal  0.477245  normal  0.933916 
 
 
-
 
NC_007778  RPB_0019  short-chain dehydrogenase/reductase SDR  37.7 
 
 
245 aa  155  7e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0125  putative short-chain dehydrogenase  42.53 
 
 
251 aa  154  1e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_3648  short-chain dehydrogenase/reductase SDR  40.27 
 
 
233 aa  152  5e-36  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.325516  hitchhiker  0.000000000000965184 
 
 
-
 
NC_007952  Bxe_B1429  putative short chain dehydrogenase  41.18 
 
 
255 aa  150  1e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0142778 
 
 
-
 
NC_007958  RPD_0728  short-chain dehydrogenase/reductase SDR  37.3 
 
 
245 aa  150  2e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.167282  normal  0.978745 
 
 
-
 
NC_011894  Mnod_1232  short-chain dehydrogenase/reductase SDR  46.41 
 
 
246 aa  148  8e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
BN001306  ANIA_02694  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G14000)  39.75 
 
 
243 aa  143  2e-33  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_008347  Mmar10_2560  short-chain dehydrogenase/reductase SDR  39.57 
 
 
248 aa  144  2e-33  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4172  short-chain dehydrogenase/reductase SDR  40.41 
 
 
246 aa  142  4e-33  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0714  short chain dehydrogenase/reductase family oxidoreductase  41.08 
 
 
258 aa  141  9.999999999999999e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2436  short chain dehydrogenase/reductase family oxidoreductase  41.08 
 
 
292 aa  140  9.999999999999999e-33  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1240  short chain dehydrogenase/reductase family oxidoreductase  41.08 
 
 
258 aa  140  9.999999999999999e-33  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1712  short chain dehydrogenase/reductase family oxidoreductase  41.08 
 
 
258 aa  141  9.999999999999999e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  0.595621  n/a   
 
 
-
 
NC_008835  BMA10229_0749  short chain dehydrogenase/reductase family oxidoreductase  41.08 
 
 
258 aa  141  9.999999999999999e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  0.66118  n/a   
 
 
-
 
NC_008825  Mpe_A0908  short chain dehydrogenase/reductase family oxidoreductase  41.52 
 
 
246 aa  140  1.9999999999999998e-32  Methylibium petroleiphilum PM1  Bacteria  normal  0.700496  normal 
 
 
-
 
NC_009078  BURPS1106A_A1166  short chain dehydrogenase/reductase family oxidoreductase  41.08 
 
 
253 aa  140  1.9999999999999998e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.932986  n/a   
 
 
-
 
NC_007650  BTH_II1562  short chain dehydrogenase/reductase family oxidoreductase  41.08 
 
 
278 aa  134  1.9999999999999998e-30  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1663  short-chain dehydrogenase/reductase SDR  36.32 
 
 
242 aa  131  9e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.73156 
 
 
-
 
NC_011666  Msil_2480  short-chain dehydrogenase/reductase SDR  43.44 
 
 
246 aa  130  2.0000000000000002e-29  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0431623 
 
 
-
 
NC_011677  PHATRDRAFT_20677  predicted protein  36.91 
 
 
236 aa  130  2.0000000000000002e-29  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.732911  n/a   
 
 
-
 
BN001306  ANIA_03293  conserved hypothetical protein  32.11 
 
 
264 aa  129  5.0000000000000004e-29  Aspergillus nidulans FGSC A4  Eukaryota  normal  hitchhiker  0.00545103 
 
 
-
 
NC_010335  Caul_5092  short-chain dehydrogenase/reductase SDR  41.84 
 
 
251 aa  125  5e-28  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7237  short-chain dehydrogenase/reductase SDR  33.18 
 
 
219 aa  99.8  4e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.154876 
 
 
-
 
NC_013946  Mrub_2663  short-chain dehydrogenase/reductase SDR  30.84 
 
 
223 aa  98.2  1e-19  Meiothermus ruber DSM 1279  Bacteria  normal  0.0806926  normal  0.0269236 
 
 
-
 
NC_010571  Oter_1569  short-chain dehydrogenase/reductase SDR  33.63 
 
 
248 aa  92  8e-18  Opitutus terrae PB90-1  Bacteria  normal  0.31881  normal  0.311726 
 
 
-
 
NC_007494  RSP_3704  ribitol 2-dehydrogenase  29.44 
 
 
242 aa  90.1  3e-17  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0194179  n/a   
 
 
-
 
NC_009050  Rsph17029_3439  short-chain dehydrogenase/reductase SDR  29.44 
 
 
242 aa  89.4  4e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.432228  normal  0.172145 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  35.84 
 
 
273 aa  88.6  8e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6256  short-chain dehydrogenase/reductase SDR  30 
 
 
242 aa  87.8  1e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.88898  normal 
 
 
-
 
NC_011884  Cyan7425_5218  short-chain dehydrogenase/reductase SDR  31.36 
 
 
236 aa  88.2  1e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.901767  normal 
 
 
-
 
NC_010803  Clim_2370  short-chain dehydrogenase/reductase SDR  30.52 
 
 
253 aa  85.5  6e-16  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4881  short-chain dehydrogenase/reductase SDR  32.49 
 
 
271 aa  85.9  6e-16  Ralstonia pickettii 12J  Bacteria  normal  0.169206  normal  0.0484523 
 
 
-
 
NC_012857  Rpic12D_3804  short-chain dehydrogenase/reductase SDR  32.49 
 
 
271 aa  85.9  6e-16  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_006679  CNJ00930  conserved hypothetical protein  28.8 
 
 
252 aa  85.1  8e-16  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0706  short-chain dehydrogenase/reductase SDR  31.3 
 
 
242 aa  84.3  0.000000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  hitchhiker  0.00246779  n/a   
 
 
-
 
NC_013132  Cpin_1759  short-chain dehydrogenase/reductase SDR  30.64 
 
 
250 aa  83.6  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.880714  normal 
 
 
-
 
NC_013501  Rmar_0194  short-chain dehydrogenase/reductase SDR  33.19 
 
 
233 aa  84  0.000000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0243  ribitol dehydrogenase  27.27 
 
 
242 aa  84  0.000000000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4610  short-chain dehydrogenase/reductase SDR  33.87 
 
 
261 aa  83.6  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2555  short-chain dehydrogenase/reductase SDR  25.88 
 
 
231 aa  82.4  0.000000000000006  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.459049  n/a   
 
 
-
 
NC_009487  SaurJH9_2505  short-chain dehydrogenase/reductase SDR  25.88 
 
 
231 aa  82.4  0.000000000000006  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0117  acetoin reductase  34.08 
 
 
258 aa  82.4  0.000000000000006  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.713741  n/a   
 
 
-
 
NC_013165  Shel_12720  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  25.88 
 
 
262 aa  82.4  0.000000000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7375  ribitol 2-dehydrogenase  28.75 
 
 
242 aa  82  0.000000000000008  Agrobacterium vitis S4  Bacteria  normal  0.144533  n/a   
 
 
-
 
NC_004311  BRA0268  ribitol dehydrogenase  26.84 
 
 
242 aa  81.6  0.000000000000009  Brucella suis 1330  Bacteria  normal  0.245269  n/a   
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  28.95 
 
 
233 aa  81.3  0.00000000000001  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_011661  Dtur_0422  sorbitol-6-phosphate dehydrogenase  27.98 
 
 
265 aa  81.3  0.00000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0026318  n/a   
 
 
-
 
NC_009668  Oant_2815  short-chain dehydrogenase/reductase SDR  27.31 
 
 
242 aa  81.6  0.00000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1386  short-chain dehydrogenase/reductase SDR  29.61 
 
 
251 aa  81.3  0.00000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6443  short-chain dehydrogenase/reductase SDR  29.61 
 
 
259 aa  81.3  0.00000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0150364  normal 
 
 
-
 
NC_010512  Bcenmc03_6034  short-chain dehydrogenase/reductase SDR  29.61 
 
 
249 aa  81.3  0.00000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311099  normal  0.357873 
 
 
-
 
NC_011365  Gdia_3096  short-chain dehydrogenase/reductase SDR  30.65 
 
 
266 aa  80.5  0.00000000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.483374 
 
 
-
 
NC_007947  Mfla_1148  short-chain dehydrogenase/reductase SDR  26.82 
 
 
217 aa  79.7  0.00000000000003  Methylobacillus flagellatus KT  Bacteria  normal  0.0937479  normal  0.693303 
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  26.34 
 
 
238 aa  79  0.00000000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05466  dehydrogenase oxidoreductase protein  34.59 
 
 
255 aa  78.6  0.00000000000008  Ralstonia solanacearum GMI1000  Bacteria  normal  0.968817  normal  0.104137 
 
 
-
 
NC_008782  Ajs_0231  short-chain dehydrogenase/reductase SDR  37.71 
 
 
258 aa  78.6  0.00000000000008  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11957  short chain dehydrogenase  28.57 
 
 
255 aa  78.2  0.00000000000009  Mycobacterium tuberculosis F11  Bacteria  normal  0.0556392  normal  0.717734 
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  27.87 
 
 
238 aa  78.2  0.0000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_008527  LACR_0363  acetoin reductase  34.39 
 
 
232 aa  77.8  0.0000000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4052  short-chain dehydrogenase/reductase SDR  34.1 
 
 
248 aa  77.8  0.0000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  26.43 
 
 
238 aa  77.8  0.0000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_009338  Mflv_0798  short-chain dehydrogenase/reductase SDR  30.19 
 
 
254 aa  77.4  0.0000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_4437  short-chain dehydrogenase/reductase SDR  35.96 
 
 
249 aa  77.4  0.0000000000002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
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