| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0817 |
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| Symbol | |
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| ID | 7972032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 901434 |
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| End bp | 902246 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791415 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002942736 |
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| Protein GI | 239813826 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCTC TGCCACCCGA GGGGGCGCTC GCTTGCTTGG GGCGGCCCGG CGCGGCGCTC
GTGACCATGG CACTCACCAA AGCCGCGCTC ATCGTCGGCG CCGGCGACGC CACCGGCGGC
GCCATCGCGC GCCGTTTCGC GCGCGAAGGC TATGCCGCCT GCGTCACGCG CCGCAGCCTC
GACAAGCTGC AGCCGCTGGT CGCGCAGATC GAGGCCGCGG GCGGCCGCGC CCATGCCTTT
GCGTGCGACG CGCGCAAGGA AGAGGAAGTG GTGGCGCTCG TCGAGCAGAT CGAATCGACG
ATCGGGCCGA TCGAGGTGAT GGTGTTCAAC ATCGGCGCCA ACGTGCCCGA GAGCATCCTG
GCCGAGACCG CGCGCAAGTA TTTCAAGGTG TGGGAGATGG CCTGCTTCTC GGGCTTTCTG
AACGGGCGCG AGGTGGCCAG GCGCATGGTG GCGCGCGCGA TGCCGAAGAG CGGGCACCGC
GGCACGATCA TCTTCACGGG CGCCACGGCG TCGCTGCGCG GCGCGGCCAA CTTCGGCGCG
TTCTCGGGCG CGAAGATGGC GCTGCGCGCG CTGGCCCAGT CGATGGCGCG CGAGCTCGGG
CCAGAGGGCA TTCACGTCGC GCACGTGGTG GTCGACGGCG CCATCGACAC CGAGTTCATC
CGCAGCAATT TTCCCGAGCG CTATGCGCTG AAGCAGAGCG ACGGCATCCT GAACCCCGAG
CACATCGCCG ACAGCTACTG GATGCTGCAC TCGCAGCCGC GCGACGCCTG GACGCACGAG
CTCGATCTGC GGCCTTGGTC GGAGAAGTTT TGA
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| Protein sequence | MSSLPPEGAL ACLGRPGAAL VTMALTKAAL IVGAGDATGG AIARRFAREG YAACVTRRSL
DKLQPLVAQI EAAGGRAHAF ACDARKEEEV VALVEQIEST IGPIEVMVFN IGANVPESIL
AETARKYFKV WEMACFSGFL NGREVARRMV ARAMPKSGHR GTIIFTGATA SLRGAANFGA
FSGAKMALRA LAQSMARELG PEGIHVAHVV VDGAIDTEFI RSNFPERYAL KQSDGILNPE
HIADSYWMLH SQPRDAWTHE LDLRPWSEKF
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