Gene Spro_4437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4437 
Symbol 
ID5604035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4909048 
End bp4909797 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content60% 
IMG OID640939999 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001480659 
Protein GI157372670 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA CTCTCTCTCT GCAAGGCAAA GTCGCATTCA TTCAGGGCGG TTCACGCGGC 
ATCGGTGCCG CCATCGCCAA ACGCCTGGCG CGCGAAGGTG CCGCTGTGGC ATTAACCTAC
GTCGCCTCTG CCGACAAAGC CGATGCGGTG GTGAGTGAAA TCACTGCTGC CGGCGGCAAG
GCGCTGGCGA TCAAGGCCGA CAGTGCTGAT GCAACAGCGC TGCAACAGGC GGTGCGCCAG
GCAGTAAACA GCCTGGGCAA TCTGGATATT TTGGTGAACA ACGCCGGTGT GCTGGCGATG
GGCAGCACCG AAGAACTGCC GCTGGAAGAT CTGGACCGCA CGCTGGCGGT GAACGTCCGC
AGCGTATTTG TCGCCAGTCA GGAAGCCGCG CGTCATATGA ATGATGGCGG TCGCATCATC
AATATTGGCA GCACCAACGC CGAACGTATG CCATTTGCCG GCGGCGCGGT ATATGCGATG
AGTAAATCTG CGCTGGTCGG CCTGACCAAA GGCATGGCAC GCGATCTCGG CCCACGCGGC
ATTACCGTCA ACAACGTGCA GCCCGGCCCG GTAGATACCG ATATGAACCC GGACAACAGC
GATTTCGCCG AGCAGTTGAA AGGGATGATG GCGATCGGTC GTTACGGCAA GGACGAAGAG
ATCGCCAGCT TCGTCGCTTA TCTGGTTGGC CCCGAGGCGG GATATATCAC CGGTGCCAGC
CTGAGCATCG ACGGCGGCTT CTCGGCTTAA
 
Protein sequence
MSATLSLQGK VAFIQGGSRG IGAAIAKRLA REGAAVALTY VASADKADAV VSEITAAGGK 
ALAIKADSAD ATALQQAVRQ AVNSLGNLDI LVNNAGVLAM GSTEELPLED LDRTLAVNVR
SVFVASQEAA RHMNDGGRII NIGSTNAERM PFAGGAVYAM SKSALVGLTK GMARDLGPRG
ITVNNVQPGP VDTDMNPDNS DFAEQLKGMM AIGRYGKDEE IASFVAYLVG PEAGYITGAS
LSIDGGFSA