Gene PA14_01430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_01430 
Symbol 
ID4383536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp135162 
End bp135890 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID639322674 
Productputative short chain dehydrogenase 
Protein accessionYP_788275 
Protein GI116053838 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC GCAAAGCGGT TCTGGTAATG GGCGCCGGCG ACGCCACCGG TGGCGCCATC 
GCCCGGCGGT TCGCCCGCGA GGGCTACGTG GCGTGCGTCG CCCGGCGCAA CGCGGAGAAG
CTGGAGCCGC TGGTGCAGGC CATCCGCGAC CAAGGCGGCG AGGCCCTGGC CTGCGGCTGC
GACGCACGCC AGGAGCAGCA GGTGATCGAC CTCTTCGCCC GCATCGAGGG TGAGGTCGGT
GCGCTGGAGG CGGTGATCTT CAACGTCGGC GCCAACGTCT GGTTCCCGAT CACCGAAACC
ACCGAACGGG TCTATCGCAA GGTCTGGGAG ATGGCCGCCT TCGGCGGCTT CCTCACCGGC
CGCGAGGCGG CGCGGGTGAT GCTGCCGCGG CAGCGCGGAA CGATCATCTT CACTGGCGCC
ACCGCCTCGT TGCGCGGCCG CGCGCATTTC GCCGCGTTCT CCGGCGCCAA GTTCGCCCTG
CGTGCCCTGG CCCAGAGCAT GGCGCGCGAG CTGGGGCCGA AGGGCATCCA CGTCGCCCAC
CCGATCATCG ACGGCGCCAT CGACACCGAC TTCATCCGCG AAACCCTGCC CGAGCTGTAC
AAGCGCAAGG AGCAGGACGG CATCCTCGAT CCCGAGCACA TCGCCGAGAC CTACTGGCAG
ATCCACTGCC AGCCGCGCGA CTGCTGGGTA CACGAACTGG ACCTGCGCCC CTGGATGGAA
ACCTTCTGA
 
Protein sequence
MTQRKAVLVM GAGDATGGAI ARRFAREGYV ACVARRNAEK LEPLVQAIRD QGGEALACGC 
DARQEQQVID LFARIEGEVG ALEAVIFNVG ANVWFPITET TERVYRKVWE MAAFGGFLTG
REAARVMLPR QRGTIIFTGA TASLRGRAHF AAFSGAKFAL RALAQSMARE LGPKGIHVAH
PIIDGAIDTD FIRETLPELY KRKEQDGILD PEHIAETYWQ IHCQPRDCWV HELDLRPWME
TF