Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_01430 |
Symbol | |
ID | 4383536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 135162 |
End bp | 135890 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639322674 |
Product | putative short chain dehydrogenase |
Protein accession | YP_788275 |
Protein GI | 116053838 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC GCAAAGCGGT TCTGGTAATG GGCGCCGGCG ACGCCACCGG TGGCGCCATC GCCCGGCGGT TCGCCCGCGA GGGCTACGTG GCGTGCGTCG CCCGGCGCAA CGCGGAGAAG CTGGAGCCGC TGGTGCAGGC CATCCGCGAC CAAGGCGGCG AGGCCCTGGC CTGCGGCTGC GACGCACGCC AGGAGCAGCA GGTGATCGAC CTCTTCGCCC GCATCGAGGG TGAGGTCGGT GCGCTGGAGG CGGTGATCTT CAACGTCGGC GCCAACGTCT GGTTCCCGAT CACCGAAACC ACCGAACGGG TCTATCGCAA GGTCTGGGAG ATGGCCGCCT TCGGCGGCTT CCTCACCGGC CGCGAGGCGG CGCGGGTGAT GCTGCCGCGG CAGCGCGGAA CGATCATCTT CACTGGCGCC ACCGCCTCGT TGCGCGGCCG CGCGCATTTC GCCGCGTTCT CCGGCGCCAA GTTCGCCCTG CGTGCCCTGG CCCAGAGCAT GGCGCGCGAG CTGGGGCCGA AGGGCATCCA CGTCGCCCAC CCGATCATCG ACGGCGCCAT CGACACCGAC TTCATCCGCG AAACCCTGCC CGAGCTGTAC AAGCGCAAGG AGCAGGACGG CATCCTCGAT CCCGAGCACA TCGCCGAGAC CTACTGGCAG ATCCACTGCC AGCCGCGCGA CTGCTGGGTA CACGAACTGG ACCTGCGCCC CTGGATGGAA ACCTTCTGA
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Protein sequence | MTQRKAVLVM GAGDATGGAI ARRFAREGYV ACVARRNAEK LEPLVQAIRD QGGEALACGC DARQEQQVID LFARIEGEVG ALEAVIFNVG ANVWFPITET TERVYRKVWE MAAFGGFLTG REAARVMLPR QRGTIIFTGA TASLRGRAHF AAFSGAKFAL RALAQSMARE LGPKGIHVAH PIIDGAIDTD FIRETLPELY KRKEQDGILD PEHIAETYWQ IHCQPRDCWV HELDLRPWME TF
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