Gene Caul_5258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5258 
Symbol 
ID5897388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp192983 
End bp193726 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID641555361 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001676692 
Protein GI167621907 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000237685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCCA GGAACGCATC GGTCGCCATC GTCGGGGCCG GAGACTATGT CGGCGCGGCG 
ATCGCCAAGA AGTTCGCGGC CGAAGGCTTC ACCGTCGTGC TGGGACGCCG AGGCGGCGAC
AAGCTGGCGC CGCTGATCGC CGAGATCGAG GCGGCCGGCG GCAAGGCGGT GGGCCGCGCG
CTAGACGCGC GCGAGGCCGA GGACGTCACC GCCTTTCTGG CCGAGGCCGA GGCCATCGCG
CCCCTGGAAG TCTGCATCTT CAACATCGGG GCCAACGTCT ATTTCCCGAT TTTGGAGACC
ACCGACCGGG TGTTTCGCAA GGTCTGGGAA ATGGCCTGCT GGTCGGGGTT CGTCACCGGC
CGTGAAGCGG CCCGGCTGAT GGTCCCGCGC GGCAGGGGGG CGATCTTCTT CACTGGCGCC
ACGGCGGGCT TGCGCGGCGG CGTCGGCTAC GCCGCCTTCG CCAGCGCCAA GTTCGGCCTT
CGGGGCATGG CCCAGGCCAT GGCTCGCGAG CTGGGACCCC AGCACATCCA CGTCGCCCAT
CTGGTCATCG ACGCGGGCGT CGACACCGCC TTCGTGCGTA ATCTGATCGC CCAGCGCGAA
GGCGGCGAGG CGGTGGCCAA CCTTGATCCA GATCGCCTGA TGGATCCAGC CTCGGTGGGG
GAGGCCTATT GGGCTCTCTA TCAGCAGTCG CCTAACGCCT GGACCTTCGA ACAGGAAATC
CGCCCCTACG GAGAAAAGTG GTGA
 
Protein sequence
MTARNASVAI VGAGDYVGAA IAKKFAAEGF TVVLGRRGGD KLAPLIAEIE AAGGKAVGRA 
LDAREAEDVT AFLAEAEAIA PLEVCIFNIG ANVYFPILET TDRVFRKVWE MACWSGFVTG
REAARLMVPR GRGAIFFTGA TAGLRGGVGY AAFASAKFGL RGMAQAMARE LGPQHIHVAH
LVIDAGVDTA FVRNLIAQRE GGEAVANLDP DRLMDPASVG EAYWALYQQS PNAWTFEQEI
RPYGEKW