Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5258 |
Symbol | |
ID | 5897388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010335 |
Strand | - |
Start bp | 192983 |
End bp | 193726 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641555361 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001676692 |
Protein GI | 167621907 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000237685 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGCCA GGAACGCATC GGTCGCCATC GTCGGGGCCG GAGACTATGT CGGCGCGGCG ATCGCCAAGA AGTTCGCGGC CGAAGGCTTC ACCGTCGTGC TGGGACGCCG AGGCGGCGAC AAGCTGGCGC CGCTGATCGC CGAGATCGAG GCGGCCGGCG GCAAGGCGGT GGGCCGCGCG CTAGACGCGC GCGAGGCCGA GGACGTCACC GCCTTTCTGG CCGAGGCCGA GGCCATCGCG CCCCTGGAAG TCTGCATCTT CAACATCGGG GCCAACGTCT ATTTCCCGAT TTTGGAGACC ACCGACCGGG TGTTTCGCAA GGTCTGGGAA ATGGCCTGCT GGTCGGGGTT CGTCACCGGC CGTGAAGCGG CCCGGCTGAT GGTCCCGCGC GGCAGGGGGG CGATCTTCTT CACTGGCGCC ACGGCGGGCT TGCGCGGCGG CGTCGGCTAC GCCGCCTTCG CCAGCGCCAA GTTCGGCCTT CGGGGCATGG CCCAGGCCAT GGCTCGCGAG CTGGGACCCC AGCACATCCA CGTCGCCCAT CTGGTCATCG ACGCGGGCGT CGACACCGCC TTCGTGCGTA ATCTGATCGC CCAGCGCGAA GGCGGCGAGG CGGTGGCCAA CCTTGATCCA GATCGCCTGA TGGATCCAGC CTCGGTGGGG GAGGCCTATT GGGCTCTCTA TCAGCAGTCG CCTAACGCCT GGACCTTCGA ACAGGAAATC CGCCCCTACG GAGAAAAGTG GTGA
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Protein sequence | MTARNASVAI VGAGDYVGAA IAKKFAAEGF TVVLGRRGGD KLAPLIAEIE AAGGKAVGRA LDAREAEDVT AFLAEAEAIA PLEVCIFNIG ANVYFPILET TDRVFRKVWE MACWSGFVTG REAARLMVPR GRGAIFFTGA TAGLRGGVGY AAFASAKFGL RGMAQAMARE LGPQHIHVAH LVIDAGVDTA FVRNLIAQRE GGEAVANLDP DRLMDPASVG EAYWALYQQS PNAWTFEQEI RPYGEKW
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