More than 300 homologs were found in PanDaTox collection
for query gene Bphy_4172 on replicon NC_010623
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010623  Bphy_4172  short-chain dehydrogenase/reductase SDR  100 
 
 
246 aa  498  1e-140  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1232  short-chain dehydrogenase/reductase SDR  67.07 
 
 
246 aa  310  1e-83  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0908  short chain dehydrogenase/reductase family oxidoreductase  65.33 
 
 
246 aa  300  1e-80  Methylibium petroleiphilum PM1  Bacteria  normal  0.700496  normal 
 
 
-
 
NC_009719  Plav_1663  short-chain dehydrogenase/reductase SDR  47.13 
 
 
242 aa  216  2e-55  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.73156 
 
 
-
 
NC_008835  BMA10229_0749  short chain dehydrogenase/reductase family oxidoreductase  47.64 
 
 
258 aa  209  2e-53  Burkholderia mallei NCTC 10229  Bacteria  normal  0.66118  n/a   
 
 
-
 
NC_006349  BMAA0714  short chain dehydrogenase/reductase family oxidoreductase  47.64 
 
 
258 aa  209  2e-53  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1712  short chain dehydrogenase/reductase family oxidoreductase  47.64 
 
 
258 aa  209  2e-53  Burkholderia mallei NCTC 10247  Bacteria  normal  0.595621  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2436  short chain dehydrogenase/reductase family oxidoreductase  47.64 
 
 
292 aa  209  3e-53  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1240  short chain dehydrogenase/reductase family oxidoreductase  47.64 
 
 
258 aa  209  3e-53  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1166  short chain dehydrogenase/reductase family oxidoreductase  47.64 
 
 
253 aa  209  4e-53  Burkholderia pseudomallei 1106a  Bacteria  normal  0.932986  n/a   
 
 
-
 
NC_007952  Bxe_B1429  putative short chain dehydrogenase  48.21 
 
 
255 aa  203  2e-51  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0142778 
 
 
-
 
NC_009719  Plav_3651  short-chain dehydrogenase/reductase SDR  43.44 
 
 
242 aa  196  3e-49  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.100527  hitchhiker  0.00000000000000573842 
 
 
-
 
NC_011666  Msil_2480  short-chain dehydrogenase/reductase SDR  50.89 
 
 
246 aa  196  3e-49  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0431623 
 
 
-
 
NC_007650  BTH_II1562  short chain dehydrogenase/reductase family oxidoreductase  47.64 
 
 
278 aa  195  5.000000000000001e-49  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0192  putative short chain dehydrogenase  41.22 
 
 
242 aa  188  7e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_01430  putative short chain dehydrogenase  40.82 
 
 
242 aa  188  9e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0125  putative short-chain dehydrogenase  45.98 
 
 
251 aa  186  3e-46  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5357  short-chain dehydrogenase/reductase SDR  42.21 
 
 
242 aa  180  1e-44  Delftia acidovorans SPH-1  Bacteria  normal  0.735069  normal 
 
 
-
 
NC_010815  Glov_3712  short-chain dehydrogenase/reductase SDR  39.42 
 
 
244 aa  172  5.999999999999999e-42  Geobacter lovleyi SZ  Bacteria  normal  normal  0.0912876 
 
 
-
 
NC_008048  Sala_0501  short-chain dehydrogenase/reductase SDR  42.86 
 
 
243 aa  170  2e-41  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.824433 
 
 
-
 
NC_012791  Vapar_0817  short-chain dehydrogenase/reductase SDR  40.24 
 
 
270 aa  169  3e-41  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5150  putative short-chain dehydrogenase/reductase SDR  38.1 
 
 
245 aa  169  3e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.855408  normal  0.11304 
 
 
-
 
NC_010335  Caul_5092  short-chain dehydrogenase/reductase SDR  45.45 
 
 
251 aa  169  3e-41  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4197  short-chain dehydrogenase/reductase SDR  38.82 
 
 
298 aa  167  1e-40  Cupriavidus metallidurans CH34  Bacteria  normal  0.18326  normal 
 
 
-
 
NC_007336  Reut_C6063  Short-chain dehydrogenase/reductase SDR  39.92 
 
 
244 aa  166  2e-40  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0019  short-chain dehydrogenase/reductase SDR  38.89 
 
 
245 aa  162  3e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0017  short-chain dehydrogenase/reductase SDR  38.1 
 
 
245 aa  163  3e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2560  short-chain dehydrogenase/reductase SDR  40.48 
 
 
248 aa  162  5.0000000000000005e-39  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6052  Short-chain dehydrogenase/reductase SDR  41.98 
 
 
244 aa  157  1e-37  Ralstonia eutropha JMP134  Bacteria  normal  0.110774  n/a   
 
 
-
 
NC_011369  Rleg2_0211  short-chain dehydrogenase/reductase SDR  40.33 
 
 
233 aa  156  2e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0728  short-chain dehydrogenase/reductase SDR  37.55 
 
 
245 aa  156  2e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.167282  normal  0.978745 
 
 
-
 
NC_008148  Rxyl_3013  short-chain dehydrogenase/reductase SDR  41.08 
 
 
236 aa  156  2e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0314  putative acetoin(diacetyl) reductase  37.15 
 
 
245 aa  155  8e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.417582  normal  0.615312 
 
 
-
 
NC_010335  Caul_5258  short-chain dehydrogenase/reductase SDR  36 
 
 
247 aa  154  1e-36  Caulobacter sp. K31  Bacteria  normal  hitchhiker  0.000237685 
 
 
-
 
NC_011004  Rpal_0022  short-chain dehydrogenase/reductase SDR  36.51 
 
 
245 aa  152  4e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3907  Short-chain dehydrogenase/reductase SDR  39.09 
 
 
242 aa  150  1e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.180445  normal 
 
 
-
 
NC_010676  Bphyt_5693  short-chain dehydrogenase/reductase SDR  38.65 
 
 
232 aa  150  1e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.406883 
 
 
-
 
NC_012792  Vapar_5354  short-chain dehydrogenase/reductase SDR  38.52 
 
 
246 aa  150  2e-35  Variovorax paradoxus S110  Bacteria  normal  0.495414  n/a   
 
 
-
 
NC_007348  Reut_B4725  Short-chain dehydrogenase/reductase SDR  40.25 
 
 
246 aa  148  8e-35  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7134  putative 3-oxoacyl-(acyl-carrier-protein) reductase  39.42 
 
 
233 aa  147  2.0000000000000003e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.269687  normal 
 
 
-
 
NC_009439  Pmen_2625  short-chain dehydrogenase/reductase SDR  39.02 
 
 
243 aa  146  3e-34  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.720898 
 
 
-
 
NC_009720  Xaut_4300  short-chain dehydrogenase/reductase SDR  37.55 
 
 
231 aa  142  7e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0240  short-chain dehydrogenase/reductase SDR  38.02 
 
 
233 aa  138  6e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.377738  normal 
 
 
-
 
NC_007413  Ava_4758  Short-chain dehydrogenase/reductase SDR  36.95 
 
 
229 aa  136  3.0000000000000003e-31  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000972291  normal 
 
 
-
 
NC_010322  PputGB1_2901  short-chain dehydrogenase/reductase SDR  36.99 
 
 
243 aa  135  8e-31  Pseudomonas putida GB-1  Bacteria  normal  0.997812  normal 
 
 
-
 
NC_009484  Acry_1425  short-chain dehydrogenase/reductase SDR  40.41 
 
 
236 aa  134  9.999999999999999e-31  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2881  short chain dehydrogenase/reductase family oxidoreductase  36.99 
 
 
243 aa  134  1.9999999999999998e-30  Pseudomonas putida KT2440  Bacteria  normal  0.959841  normal  0.948307 
 
 
-
 
NC_010501  PputW619_2385  short-chain dehydrogenase/reductase SDR  36.99 
 
 
243 aa  134  1.9999999999999998e-30  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
BN001306  ANIA_02694  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G14000)  36.14 
 
 
243 aa  132  5e-30  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009512  Pput_2809  short-chain dehydrogenase/reductase SDR  36.99 
 
 
243 aa  132  5e-30  Pseudomonas putida F1  Bacteria  normal  0.477245  normal  0.933916 
 
 
-
 
NC_011677  PHATRDRAFT_20677  predicted protein  36.93 
 
 
236 aa  130  2.0000000000000002e-29  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.732911  n/a   
 
 
-
 
NC_011757  Mchl_4178  short-chain dehydrogenase/reductase SDR  40.16 
 
 
233 aa  128  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.585089  normal  0.589272 
 
 
-
 
NC_010725  Mpop_4325  short-chain dehydrogenase/reductase SDR  39.34 
 
 
233 aa  123  3e-27  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal 
 
 
-
 
NC_010172  Mext_3869  short-chain dehydrogenase/reductase SDR  38.52 
 
 
233 aa  123  3e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0675753 
 
 
-
 
BN001306  ANIA_03293  conserved hypothetical protein  30.56 
 
 
264 aa  122  7e-27  Aspergillus nidulans FGSC A4  Eukaryota  normal  hitchhiker  0.00545103 
 
 
-
 
NC_010581  Bind_3591  short-chain dehydrogenase/reductase SDR  34.84 
 
 
233 aa  122  7e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.286182  normal 
 
 
-
 
NC_010505  Mrad2831_0073  short-chain dehydrogenase/reductase SDR  37.45 
 
 
234 aa  121  9.999999999999999e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.623849  normal 
 
 
-
 
NC_013743  Htur_2193  short-chain dehydrogenase/reductase SDR  36.33 
 
 
233 aa  120  9.999999999999999e-27  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009719  Plav_3648  short-chain dehydrogenase/reductase SDR  29.92 
 
 
233 aa  110  3e-23  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.325516  hitchhiker  0.000000000000965184 
 
 
-
 
NC_006679  CNJ00930  conserved hypothetical protein  34.71 
 
 
252 aa  86.3  4e-16  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_003296  RSp0947  gluconate 5-dehydrogenase oxidoreductase protein  29.65 
 
 
258 aa  80.1  0.00000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.815693 
 
 
-
 
NC_011886  Achl_0471  short-chain dehydrogenase/reductase SDR  30.68 
 
 
256 aa  80.1  0.00000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013946  Mrub_2663  short-chain dehydrogenase/reductase SDR  24.89 
 
 
223 aa  78.2  0.0000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.0806926  normal  0.0269236 
 
 
-
 
NC_009668  Oant_3756  gluconate 5-dehydrogenase  27.33 
 
 
257 aa  75.9  0.0000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0747  short-chain dehydrogenase/reductase SDR  26.86 
 
 
239 aa  73.9  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.785555  normal  0.162372 
 
 
-
 
NC_013595  Sros_7237  short-chain dehydrogenase/reductase SDR  26.18 
 
 
219 aa  73.9  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.154876 
 
 
-
 
NC_013510  Tcur_3491  short-chain dehydrogenase/reductase SDR  30.15 
 
 
253 aa  73.9  0.000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.260507  n/a   
 
 
-
 
NC_007963  Csal_1129  short-chain dehydrogenase/reductase SDR  32.16 
 
 
254 aa  73.2  0.000000000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.40266  n/a   
 
 
-
 
NC_011886  Achl_0214  short-chain dehydrogenase/reductase SDR  29.53 
 
 
256 aa  72.8  0.000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009077  Mjls_3724  short-chain dehydrogenase/reductase SDR  28.74 
 
 
247 aa  72.8  0.000000000005  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3711  short-chain dehydrogenase/reductase SDR  28.74 
 
 
247 aa  72.8  0.000000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3784  short-chain dehydrogenase/reductase SDR  28.74 
 
 
247 aa  72.8  0.000000000005  Mycobacterium sp. KMS  Bacteria  normal  0.513657  normal  0.265032 
 
 
-
 
NC_008541  Arth_2452  short-chain dehydrogenase/reductase SDR  30.06 
 
 
256 aa  71.2  0.00000000001  Arthrobacter sp. FB24  Bacteria  normal  0.358595  n/a   
 
 
-
 
NC_008782  Ajs_0231  short-chain dehydrogenase/reductase SDR  32.54 
 
 
258 aa  70.5  0.00000000002  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1991  short chain dehydrogenase/reductase family oxidoreductase  28.38 
 
 
251 aa  70.5  0.00000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.371693  n/a   
 
 
-
 
NC_009079  BMA10247_A2278  short chain dehydrogenase/reductase family oxidoreductase  28.38 
 
 
251 aa  70.5  0.00000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1390  short chain dehydrogenase/reductase family oxidoreductase  28.38 
 
 
251 aa  70.5  0.00000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.399104  n/a   
 
 
-
 
NC_008784  BMASAVP1_1014  short chain dehydrogenase/reductase family oxidoreductase  28.38 
 
 
251 aa  70.5  0.00000000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1473  short-chain dehydrogenase/reductase SDR  29.38 
 
 
249 aa  70.1  0.00000000003  Mycobacterium sp. JLS  Bacteria  normal  0.162054  normal 
 
 
-
 
NC_009720  Xaut_2437  short-chain dehydrogenase/reductase SDR  28.33 
 
 
255 aa  70.5  0.00000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A3043  short chain dehydrogenase/reductase family oxidoreductase  28.38 
 
 
251 aa  70.5  0.00000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1498  short-chain dehydrogenase/reductase SDR  28.93 
 
 
256 aa  70.1  0.00000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_1302  short chain dehydrogenase/reductase family oxidoreductase  28.38 
 
 
251 aa  70.5  0.00000000003  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2194  Short-chain dehydrogenase/reductase SDR  28.14 
 
 
255 aa  69.7  0.00000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000131904  normal  0.0140674 
 
 
-
 
NC_007948  Bpro_3524  short-chain dehydrogenase/reductase SDR  26.16 
 
 
272 aa  69.7  0.00000000004  Polaromonas sp. JS666  Bacteria  normal  0.382394  normal  0.103507 
 
 
-
 
NC_009675  Anae109_3255  short-chain dehydrogenase/reductase SDR  28.04 
 
 
250 aa  68.9  0.00000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1474  short-chain dehydrogenase/reductase SDR  28.34 
 
 
183 aa  68.9  0.00000000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2303  short-chain dehydrogenase/reductase SDR  24.19 
 
 
269 aa  68.6  0.00000000008  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00148918 
 
 
-
 
NC_007947  Mfla_1148  short-chain dehydrogenase/reductase SDR  24.03 
 
 
217 aa  68.6  0.00000000009  Methylobacillus flagellatus KT  Bacteria  normal  0.0937479  normal  0.693303 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  23.15 
 
 
236 aa  67  0.0000000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_010581  Bind_1480  short-chain dehydrogenase/reductase SDR  29.82 
 
 
250 aa  67.4  0.0000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.228128  normal 
 
 
-
 
NC_009075  BURPS668_A3172  short chain dehydrogenase/reductase family oxidoreductase  27.95 
 
 
251 aa  67.4  0.0000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2807  short-chain dehydrogenase/reductase SDR  28.57 
 
 
253 aa  67  0.0000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.422647 
 
 
-
 
NC_010557  BamMC406_6401  short-chain dehydrogenase/reductase SDR  26.67 
 
 
249 aa  67.8  0.0000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.476786  normal  0.058074 
 
 
-
 
NC_010512  Bcenmc03_6905  short-chain dehydrogenase/reductase SDR  25.33 
 
 
254 aa  67  0.0000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0258116  normal 
 
 
-
 
NC_007517  Gmet_2206  Short-chain dehydrogenase/reductase SDR  27.68 
 
 
254 aa  66.6  0.0000000003  Geobacter metallireducens GS-15  Bacteria  normal  0.0824665  hitchhiker  0.00853535 
 
 
-
 
NC_010571  Oter_1273  short-chain dehydrogenase/reductase SDR  28.49 
 
 
257 aa  66.6  0.0000000003  Opitutus terrae PB90-1  Bacteria  normal  0.355177  normal 
 
 
-
 
NC_011898  Ccel_0684  3-oxoacyl-(acyl-carrier-protein) reductase  28.33 
 
 
245 aa  66.6  0.0000000003  Clostridium cellulolyticum H10  Bacteria  normal  0.015461  n/a   
 
 
-
 
NC_008392  Bamb_5653  short-chain dehydrogenase/reductase SDR  26.25 
 
 
251 aa  66.6  0.0000000003  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.383425 
 
 
-
 
NC_009338  Mflv_2469  short-chain dehydrogenase/reductase SDR  27.47 
 
 
249 aa  66.2  0.0000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
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