Gene Mext_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3869 
Symbol 
ID5832836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4297007 
End bp4297708 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content72% 
IMG OID641369659 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001641312 
Protein GI163853269 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0675753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCGA CCTACCAGCG CGCCCTGATC GTCGGTGCCG GCCCCGGCCT GAGCGCCTCG 
CTGGCGCGCC TGTTCACGGC CGAGGGGCTG AAGGTCGGGC TCGCCGCGCG CAACACCGAA
AAACTCAACG ACCTCGCCGC GGAGACGGGG GCCGTCATCC ATGCCTGCGA TGCCACCGAT
CCGGGCGCGG TCGAGGCTCT GTTCCCCCGG CTCGAACCGG CGCTCGGCGG TGCGCCGGAC
GTGGTGGTCT ACAATGCCAG CGGACGGCTG CGCGGCGCCA CTGTCGATCT CGATCCGGAG
GCGGTGGCCC GCGCCCTCTC GGTCTCGGCC TATGGCGGCT TCCTCGTGGC GCAGGCCGCC
GCCCGGCGGA TGCTGCCCCA CCGCCACGGC GCGATCCTGT TCACCGGTGC CTCGGCGAGC
GTGAAGGGAT TTGCGGGCTC GGCCCCCTTC GCCATGGGCA AGTTCGCCCT GCGCGGCCTC
GCGCAGAGCC TTGCCCGGGA GCTTCAGCCC CAGGGCATCC ATGTCGCCCA TATCGTGATC
GACGGCGCCA TCCGCTCCGC CGCCCGGCCC GATCCGCAGG ACCATCCCGA CGCGACCCTC
GATCCGGACG CCATCGCGAA GGGCTATCTC GCCCTCCTGC GCCAGGATCG CAGCGCCTGG
ACCGATGAGA TCACCCTGCG GCCGTGGGTC GAGCACTTTT GA
 
Protein sequence
MVPTYQRALI VGAGPGLSAS LARLFTAEGL KVGLAARNTE KLNDLAAETG AVIHACDATD 
PGAVEALFPR LEPALGGAPD VVVYNASGRL RGATVDLDPE AVARALSVSA YGGFLVAQAA
ARRMLPHRHG AILFTGASAS VKGFAGSAPF AMGKFALRGL AQSLARELQP QGIHVAHIVI
DGAIRSAARP DPQDHPDATL DPDAIAKGYL ALLRQDRSAW TDEITLRPWV EHF