| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0501 |
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| Symbol | |
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| ID | 4081391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 519303 |
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| End bp | 520034 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008859 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_615555 |
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| Protein GI | 103485994 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.824433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCATC CCGCAGCTGT CATCATCGGA GCCGGAGACG CCACCGGCGG CGCGATCGCG
CGCGCATTTG CCGCCGCAGG CCTTACCGCC TGCGTCAACC GGCGGGCCCG CAACGCCGAC
CAGCTCGAAG CCCTCGCCCA GTCGATCCGC GACGCGGGAC ACAAGGCGCG CGCTTTCCCC
GCCGACGCCC GCGACGAGAA CGCAATGATC GAGCTGTTCG ACACGGTCGA GGCCGAGGTC
GGGCCGGTCG AGGTGGCGGT GTTCAACATC GGCGCCAACG TCAATTTCCC GATCGCCGAA
ACGACGCTGC GCGTTTACAC AAAGGTGTGG GAAATGGCGT GTCTCGGCGG CTTCCTGATG
GGGCGCGAGG CGGCAAAGCG CATGGCGCCG CGCGGCCGCG GCACGATCAT CTTCACCGGC
GCAACCGCCA GCTTGCGCGG CGGATCGGGT TACGCCGCCT TTTCGGGTGC GAAGGGGGCG
CTCAGGATGC TCGCCCAGTC GATGGCGCGC GAACTGGGGC CGCGGGGCAT CCATGTCGCG
CACACGGTGA TCGACGGCGC GATCGACACC GATTTCATCA GGGGCCGCCA CCCCGATTTC
GACAATGCAA GGGCGCAGGA CCTGATCCTG AACCCAGAGG CCATCGCCGC CAATTATGTG
ACGCTCCACA AACAGCCGAA AAGCGCGTGG ACGCACGAAC TCGACCTTCG CCCGTGGGGA
GAAACATGGT GA
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| Protein sequence | MSHPAAVIIG AGDATGGAIA RAFAAAGLTA CVNRRARNAD QLEALAQSIR DAGHKARAFP
ADARDENAMI ELFDTVEAEV GPVEVAVFNI GANVNFPIAE TTLRVYTKVW EMACLGGFLM
GREAAKRMAP RGRGTIIFTG ATASLRGGSG YAAFSGAKGA LRMLAQSMAR ELGPRGIHVA
HTVIDGAIDT DFIRGRHPDF DNARAQDLIL NPEAIAANYV TLHKQPKSAW THELDLRPWG
ETW
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