Gene Caul_5092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5092 
Symbol 
ID5897309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp11205 
End bp11960 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID641555195 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001676526 
Protein GI167621741 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTCAGT CAGTATCGGG ATCGGGCGCC TCGACGGCGC GGAGCGTTCT GGTCGTTGGG 
GTGGGGCCGC CCGAAGGCTT GGGCGCGGCG ATCGCCGAAC GTTTCGCGAC CGGCGGGTTC
TCTGTCGTGA TCGCCAGTCG CAACGCCGCT AAGCTGGCGG CCACGGAGGC GGCGATGCAG
GCCAAGGGGC TGGCGGTCAC CTCGGTGGTG GGCGACGTGG CCAAGGCCGA GGACGCGCGC
CGCTTCGTGG CCGCGGCTCA AGCCTTGGCC CCCTTAGCCT TGGCGGTGCA GAACGCCGGG
GCCAACAACC CGGCGCCCTT TTTAGAAGTC ACCGAAGAGG CCTTCGAGGA ACATTGGCGA
TCGCACGCCC TGGGCGGCTT CCAATTGGCT CAGGCCGCCT TGCCGGCGCT CGTCGAGCAA
GGCGGGAGCC TGATCTTCAC TGGCGCCAGC GGCAGCCTTC GCGGCAAGGC CTATTTCTCG
CCCTTCGCCG CCGCCAAGGC GGCGCTTCGC GCGACGGCTC AGAGCATTGC GCGGGAGTAT
GGTCCCAAGG GCGTTCACGT GGGCCATGTG ATCATCGACG GCGGCATCGC CGGCGAGCGG
TTCCTGACCC GCTTTCCGGG CCAGCTTGAG CAGCGCGGTC CGGACGGTCT GCTCAACATC
GACGCGATCG CCGAGGCCTA TTGGGTCCTT CACCACCAGC ACCGCAGCGC CTGGACGCTG
GAGCTGGACC TGCGTCCGTG GAGTGAAAAC TTCTAG
 
Protein sequence
MVQSVSGSGA STARSVLVVG VGPPEGLGAA IAERFATGGF SVVIASRNAA KLAATEAAMQ 
AKGLAVTSVV GDVAKAEDAR RFVAAAQALA PLALAVQNAG ANNPAPFLEV TEEAFEEHWR
SHALGGFQLA QAALPALVEQ GGSLIFTGAS GSLRGKAYFS PFAAAKAALR ATAQSIAREY
GPKGVHVGHV IIDGGIAGER FLTRFPGQLE QRGPDGLLNI DAIAEAYWVL HHQHRSAWTL
ELDLRPWSEN F