Gene BTH_II1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1562 
Symbol 
ID3844832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1834048 
End bp1834884 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content73% 
IMG OID637838863 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionYP_439757 
Protein GI83717301 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAT CTCGTTTTCC TCGGTTGGCA CGCGCGACAG ACGATATAGG GTTCGCCGAC 
ATGACGGTCG ATACGGTTTC ATCCAGTTCC ATTCCGCTCG CTTGGATCGC GGGCGTCGGC
GCGAGCGCCG GGCTCGGCGC GGCCGTCGGC CGGCGCTTCG CGCGCGCCGG CTACGGCGTC
GTGCTGACCG GGCGCACGCA CGAGCGCGTC GCCGCGGCCG CCGACGAGAT TCGCGCGCAG
GGCGGCGTCG CATACGTCGC GAGCGGCGAC ATCGCGAGCG AAGCCGACGT CGAGCGCCTC
GCGATCGAGG TGCGCACGCT CGGCACGCTG CGCGCCGCGG TGTTCAACGC GGGCAACGCG
GTTCGCGCGC CGACGCTCGA GCTGAGCGTC GCGCAGTTCG AGAGCGCGTG GCGCACGAAC
GTGATCGGCG GCTTCCTGTT CGCGAAGGCG GCGCTCGAGC AACTGCTCGA CGCGGGCGAT
GGCGCGCCGG GCGACGAAAC GCCCCGCAGC CTGCTGTTCA CGGGCGCGAC CGCGTCGCTG
CGCGGCCGCC CGCCGTTCGC CGCGTTCGCA TCGGCGAAGG CGGGCCTGCG CTCGCTCGCG
CAGACGCTCG CGCGCGAGTT CGGCCCGCGC GGCATTCACG TCGCGCACGC GGTGATCGAC
GGCGGCATCG ACGGCGAGCG GCTGCGTGGC GCGGCGCCCG AGCGCGCCGC GCAGGCGGGC
GCCGCCGGGC TGCTGTCGCC CGACGCGATC GCCGACAGCT ACTGGCAACT GCATGTGCAG
CACCGCAGTG CATGGACACA GGAGCTCGAT CTGCGCCCAT GCGACGAAGC GTTCTGA
 
Protein sequence
MNISRFPRLA RATDDIGFAD MTVDTVSSSS IPLAWIAGVG ASAGLGAAVG RRFARAGYGV 
VLTGRTHERV AAAADEIRAQ GGVAYVASGD IASEADVERL AIEVRTLGTL RAAVFNAGNA
VRAPTLELSV AQFESAWRTN VIGGFLFAKA ALEQLLDAGD GAPGDETPRS LLFTGATASL
RGRPPFAAFA SAKAGLRSLA QTLAREFGPR GIHVAHAVID GGIDGERLRG AAPERAAQAG
AAGLLSPDAI ADSYWQLHVQ HRSAWTQELD LRPCDEAF