| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4300 |
|---|
| Symbol | |
|---|
| ID | 5423734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4766753 |
|---|
| End bp | 4767448 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640883561 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001419178 |
|---|
| Protein GI | 154248220 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACAGG AAACCGCCGT TATTGTCGGT GCCGGCAAGG GCCTCAGCGC CGCCCTCGCC
CGCCGCCTCG CCAAGGATGG CTTTCGCGTC GTGCTCGTGG CCCGCGACGT GGCGAAGCTT
GCGCCCCTCG TGGCGGAAAC CGGCGGCCAG GCCATATCTG CCGACGCGCA GAGCCCGCAG
GCCATCGAGG CCATGTTCGC CGAGGTGGAC CGCACTTTCG GGCCGCCCGA TCTCGTGGTC
TTCAATGCCG CCATGCGCTA TCGCGGCCCC ATCGAGGTGC TGGACCCGGC GGACGTGATG
GACGCCTATG CGGTGGGCGC CTTTGCCGGT TTCGTCACCG CCCAGGCGGC GGCGCGGCGC
ATGCTCCAGC GCGGCAGCGG CTCCATCTTC TTCACCGGCG CCACCGCCAG CGTGAAGGCC
ATGCCCCACT CGGTGCCGTT CGCCATGGCC AAGTTCGCCC TGCGCGCCCT CGCCCAGGGC
CTCGCCCGGG AGCTGGGGCC GCGCGGCATT CACGTGGCCC ATTTCATCAT CGACGGCGGC
ATCTCCTCGT CGTGGGCGAC GCAGGGAGAG GCCGGGCCGC CGGACAAATG GCTCGATCCC
GCCGCCATCG CCGAGACCTA TCTGGCCGTG CATCGCCAGC ACCGCTCGGC CTGGACGGCT
GAGATGGAAC TGCGCCCCTG GGTCGAGAAG TTCTGA
|
|---|
| Protein sequence | MTQETAVIVG AGKGLSAALA RRLAKDGFRV VLVARDVAKL APLVAETGGQ AISADAQSPQ
AIEAMFAEVD RTFGPPDLVV FNAAMRYRGP IEVLDPADVM DAYAVGAFAG FVTAQAAARR
MLQRGSGSIF FTGATASVKA MPHSVPFAMA KFALRALAQG LARELGPRGI HVAHFIIDGG
ISSSWATQGE AGPPDKWLDP AAIAETYLAV HRQHRSAWTA EMELRPWVEK F
|
|---|
| |