More than 300 homologs were found in PanDaTox collection
for query gene Glov_3712 on replicon NC_010815
Organism: Geobacter lovleyi SZ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010815  Glov_3712  short-chain dehydrogenase/reductase SDR  100 
 
 
244 aa  496  1e-139  Geobacter lovleyi SZ  Bacteria  normal  normal  0.0912876 
 
 
-
 
NC_010002  Daci_5357  short-chain dehydrogenase/reductase SDR  60.5 
 
 
242 aa  298  4e-80  Delftia acidovorans SPH-1  Bacteria  normal  0.735069  normal 
 
 
-
 
NC_007336  Reut_C6063  Short-chain dehydrogenase/reductase SDR  59.75 
 
 
244 aa  293  2e-78  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_3651  short-chain dehydrogenase/reductase SDR  58.47 
 
 
242 aa  283  2.0000000000000002e-75  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.100527  hitchhiker  0.00000000000000573842 
 
 
-
 
NC_007974  Rmet_4197  short-chain dehydrogenase/reductase SDR  55.46 
 
 
298 aa  281  5.000000000000001e-75  Cupriavidus metallidurans CH34  Bacteria  normal  0.18326  normal 
 
 
-
 
NC_007336  Reut_C6052  Short-chain dehydrogenase/reductase SDR  62.03 
 
 
244 aa  279  3e-74  Ralstonia eutropha JMP134  Bacteria  normal  0.110774  n/a   
 
 
-
 
NC_012791  Vapar_0817  short-chain dehydrogenase/reductase SDR  59.5 
 
 
270 aa  278  6e-74  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4725  Short-chain dehydrogenase/reductase SDR  59.35 
 
 
246 aa  274  8e-73  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2625  short-chain dehydrogenase/reductase SDR  60.33 
 
 
243 aa  272  3e-72  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.720898 
 
 
-
 
NC_002947  PP_2881  short chain dehydrogenase/reductase family oxidoreductase  60.5 
 
 
243 aa  269  4e-71  Pseudomonas putida KT2440  Bacteria  normal  0.959841  normal  0.948307 
 
 
-
 
NC_007492  Pfl01_3907  Short-chain dehydrogenase/reductase SDR  59.66 
 
 
242 aa  269  4e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.180445  normal 
 
 
-
 
NC_010501  PputW619_2385  short-chain dehydrogenase/reductase SDR  59.66 
 
 
243 aa  264  8e-70  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0192  putative short chain dehydrogenase  54.24 
 
 
242 aa  264  8.999999999999999e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2901  short-chain dehydrogenase/reductase SDR  58.26 
 
 
243 aa  264  1e-69  Pseudomonas putida GB-1  Bacteria  normal  0.997812  normal 
 
 
-
 
NC_012792  Vapar_5354  short-chain dehydrogenase/reductase SDR  59.07 
 
 
246 aa  264  1e-69  Variovorax paradoxus S110  Bacteria  normal  0.495414  n/a   
 
 
-
 
NC_009512  Pput_2809  short-chain dehydrogenase/reductase SDR  59.24 
 
 
243 aa  264  1e-69  Pseudomonas putida F1  Bacteria  normal  0.477245  normal  0.933916 
 
 
-
 
NC_008463  PA14_01430  putative short chain dehydrogenase  53.81 
 
 
242 aa  260  2e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0728  short-chain dehydrogenase/reductase SDR  51.48 
 
 
245 aa  237  1e-61  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.167282  normal  0.978745 
 
 
-
 
NC_009485  BBta_0314  putative acetoin(diacetyl) reductase  49.79 
 
 
245 aa  234  7e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.417582  normal  0.615312 
 
 
-
 
NC_010335  Caul_5258  short-chain dehydrogenase/reductase SDR  51.46 
 
 
247 aa  234  8e-61  Caulobacter sp. K31  Bacteria  normal  hitchhiker  0.000237685 
 
 
-
 
NC_009485  BBta_5150  putative short-chain dehydrogenase/reductase SDR  48.54 
 
 
245 aa  234  9e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.855408  normal  0.11304 
 
 
-
 
NC_007778  RPB_0019  short-chain dehydrogenase/reductase SDR  50.63 
 
 
245 aa  234  1.0000000000000001e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0017  short-chain dehydrogenase/reductase SDR  50.21 
 
 
245 aa  234  1.0000000000000001e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0022  short-chain dehydrogenase/reductase SDR  50.63 
 
 
245 aa  233  2.0000000000000002e-60  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0501  short-chain dehydrogenase/reductase SDR  51.26 
 
 
243 aa  229  4e-59  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.824433 
 
 
-
 
NC_008347  Mmar10_2560  short-chain dehydrogenase/reductase SDR  46.25 
 
 
248 aa  204  8e-52  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1663  short-chain dehydrogenase/reductase SDR  40.83 
 
 
242 aa  189  4e-47  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.73156 
 
 
-
 
NC_011894  Mnod_1232  short-chain dehydrogenase/reductase SDR  44.08 
 
 
246 aa  187  2e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0908  short chain dehydrogenase/reductase family oxidoreductase  42.67 
 
 
246 aa  186  2e-46  Methylibium petroleiphilum PM1  Bacteria  normal  0.700496  normal 
 
 
-
 
NC_011666  Msil_2480  short-chain dehydrogenase/reductase SDR  46.15 
 
 
246 aa  183  3e-45  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0431623 
 
 
-
 
NC_009485  BBta_7134  putative 3-oxoacyl-(acyl-carrier-protein) reductase  42.8 
 
 
233 aa  182  4.0000000000000006e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.269687  normal 
 
 
-
 
NC_007953  Bxe_C0125  putative short-chain dehydrogenase  41.55 
 
 
251 aa  179  2.9999999999999997e-44  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1429  putative short chain dehydrogenase  41.1 
 
 
255 aa  177  2e-43  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0142778 
 
 
-
 
NC_009484  Acry_1425  short-chain dehydrogenase/reductase SDR  43.67 
 
 
236 aa  173  2.9999999999999996e-42  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4758  Short-chain dehydrogenase/reductase SDR  41.18 
 
 
229 aa  172  3.9999999999999995e-42  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000972291  normal 
 
 
-
 
NC_007435  BURPS1710b_A2436  short chain dehydrogenase/reductase family oxidoreductase  39.83 
 
 
292 aa  172  5e-42  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4172  short-chain dehydrogenase/reductase SDR  39.42 
 
 
246 aa  172  5.999999999999999e-42  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1240  short chain dehydrogenase/reductase family oxidoreductase  40.17 
 
 
258 aa  172  5.999999999999999e-42  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1166  short chain dehydrogenase/reductase family oxidoreductase  40.17 
 
 
253 aa  172  5.999999999999999e-42  Burkholderia pseudomallei 1106a  Bacteria  normal  0.932986  n/a   
 
 
-
 
NC_008148  Rxyl_3013  short-chain dehydrogenase/reductase SDR  40.85 
 
 
236 aa  171  6.999999999999999e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0714  short chain dehydrogenase/reductase family oxidoreductase  39.75 
 
 
258 aa  170  2e-41  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1712  short chain dehydrogenase/reductase family oxidoreductase  39.75 
 
 
258 aa  170  2e-41  Burkholderia mallei NCTC 10247  Bacteria  normal  0.595621  n/a   
 
 
-
 
NC_008835  BMA10229_0749  short chain dehydrogenase/reductase family oxidoreductase  39.75 
 
 
258 aa  170  2e-41  Burkholderia mallei NCTC 10229  Bacteria  normal  0.66118  n/a   
 
 
-
 
BN001306  ANIA_02694  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G14000)  38.68 
 
 
243 aa  169  3e-41  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_011369  Rleg2_0211  short-chain dehydrogenase/reductase SDR  39.32 
 
 
233 aa  160  1e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4178  short-chain dehydrogenase/reductase SDR  41.53 
 
 
233 aa  159  4e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.585089  normal  0.589272 
 
 
-
 
NC_010676  Bphyt_5693  short-chain dehydrogenase/reductase SDR  37.96 
 
 
232 aa  158  7e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.406883 
 
 
-
 
NC_007650  BTH_II1562  short chain dehydrogenase/reductase family oxidoreductase  39.33 
 
 
278 aa  157  1e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3591  short-chain dehydrogenase/reductase SDR  36.71 
 
 
233 aa  156  2e-37  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.286182  normal 
 
 
-
 
NC_010172  Mext_3869  short-chain dehydrogenase/reductase SDR  40.25 
 
 
233 aa  156  3e-37  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0675753 
 
 
-
 
NC_010725  Mpop_4325  short-chain dehydrogenase/reductase SDR  41.53 
 
 
233 aa  156  3e-37  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal 
 
 
-
 
NC_012850  Rleg_0240  short-chain dehydrogenase/reductase SDR  39.41 
 
 
233 aa  155  7e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.377738  normal 
 
 
-
 
NC_010505  Mrad2831_0073  short-chain dehydrogenase/reductase SDR  37.61 
 
 
234 aa  150  2e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.623849  normal 
 
 
-
 
BN001306  ANIA_03293  conserved hypothetical protein  33.73 
 
 
264 aa  145  6e-34  Aspergillus nidulans FGSC A4  Eukaryota  normal  hitchhiker  0.00545103 
 
 
-
 
NC_009720  Xaut_4300  short-chain dehydrogenase/reductase SDR  36.6 
 
 
231 aa  144  1e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_2193  short-chain dehydrogenase/reductase SDR  34.75 
 
 
233 aa  143  3e-33  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009719  Plav_3648  short-chain dehydrogenase/reductase SDR  33.47 
 
 
233 aa  134  9e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.325516  hitchhiker  0.000000000000965184 
 
 
-
 
NC_010335  Caul_5092  short-chain dehydrogenase/reductase SDR  38.66 
 
 
251 aa  131  1.0000000000000001e-29  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011677  PHATRDRAFT_20677  predicted protein  29.83 
 
 
236 aa  116  3e-25  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.732911  n/a   
 
 
-
 
NC_006679  CNJ00930  conserved hypothetical protein  31.01 
 
 
252 aa  101  1e-20  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_013946  Mrub_2663  short-chain dehydrogenase/reductase SDR  28.26 
 
 
223 aa  95.9  6e-19  Meiothermus ruber DSM 1279  Bacteria  normal  0.0806926  normal  0.0269236 
 
 
-
 
NC_013037  Dfer_4305  short-chain dehydrogenase/reductase SDR  29.89 
 
 
251 aa  89.7  4e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.400321  normal 
 
 
-
 
NC_008609  Ppro_3110  short-chain dehydrogenase/reductase SDR  32.97 
 
 
283 aa  86.7  3e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7237  short-chain dehydrogenase/reductase SDR  28.32 
 
 
219 aa  86.3  4e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.154876 
 
 
-
 
NC_007777  Francci3_0944  short-chain dehydrogenase/reductase SDR  27.4 
 
 
268 aa  86.3  4e-16  Frankia sp. CcI3  Bacteria  normal  0.0441553  normal  0.118759 
 
 
-
 
NC_009654  Mmwyl1_1518  short chain dehydrogenase  34.41 
 
 
254 aa  85.5  8e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.570528  normal  0.0138518 
 
 
-
 
NC_013730  Slin_6198  short-chain dehydrogenase/reductase SDR  30.05 
 
 
260 aa  84.3  0.000000000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5030  short-chain dehydrogenase/reductase SDR  29.02 
 
 
248 aa  84.7  0.000000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.574158  normal  0.46394 
 
 
-
 
NC_009077  Mjls_4795  short-chain dehydrogenase/reductase SDR  28.49 
 
 
262 aa  83.6  0.000000000000003  Mycobacterium sp. JLS  Bacteria  normal  normal  0.368954 
 
 
-
 
NC_008146  Mmcs_4414  short-chain dehydrogenase/reductase SDR  28.49 
 
 
262 aa  83.6  0.000000000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4501  short-chain dehydrogenase/reductase SDR  28.49 
 
 
262 aa  83.6  0.000000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_1662  3-oxoacyl-(acyl-carrier-protein) reductase  30.26 
 
 
245 aa  82.4  0.000000000000006  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0747  short-chain dehydrogenase/reductase SDR  34.03 
 
 
239 aa  82  0.000000000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.785555  normal  0.162372 
 
 
-
 
NC_010001  Cphy_1164  gluconate 5-dehydrogenase  30.37 
 
 
263 aa  82  0.000000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6034  short-chain dehydrogenase/reductase SDR  26.27 
 
 
249 aa  81.6  0.000000000000009  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311099  normal  0.357873 
 
 
-
 
NC_009338  Mflv_1776  short-chain dehydrogenase/reductase SDR  27.41 
 
 
262 aa  81.6  0.00000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.869283 
 
 
-
 
NC_007498  Pcar_2068  putative L-2,3-butanediol dehydrogenase  27.41 
 
 
261 aa  81.3  0.00000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000343042  n/a   
 
 
-
 
NC_013730  Slin_1373  3-oxoacyl-(acyl-carrier-protein) reductase  31.31 
 
 
248 aa  81.6  0.00000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.124306  normal 
 
 
-
 
NC_008060  Bcen_1386  short-chain dehydrogenase/reductase SDR  26.27 
 
 
251 aa  81.6  0.00000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1085  3-oxoacyl-[acyl-carrier-protein] reductase  29.47 
 
 
248 aa  81.6  0.00000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.021981  normal  0.0468047 
 
 
-
 
NC_008392  Bamb_5653  short-chain dehydrogenase/reductase SDR  26.27 
 
 
251 aa  81.3  0.00000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.383425 
 
 
-
 
NC_008544  Bcen2424_6443  short-chain dehydrogenase/reductase SDR  26.27 
 
 
259 aa  81.6  0.00000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0150364  normal 
 
 
-
 
NC_009523  RoseRS_1481  short-chain dehydrogenase/reductase SDR  31.44 
 
 
239 aa  80.5  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.175599  normal 
 
 
-
 
NC_010557  BamMC406_6401  short-chain dehydrogenase/reductase SDR  26.27 
 
 
249 aa  80.9  0.00000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.476786  normal  0.058074 
 
 
-
 
NC_008577  Shewana3_2690  short chain dehydrogenase  34.39 
 
 
255 aa  80.1  0.00000000000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  29.17 
 
 
248 aa  80.1  0.00000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_013525  Tter_0966  short-chain dehydrogenase/reductase SDR  29.78 
 
 
251 aa  79.7  0.00000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007335  PMN2A_1785  3-oxoacyl-[acyl-carrier-protein] reductase  27.31 
 
 
250 aa  79.7  0.00000000000004  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5719  short chain dehydrogenase  28.22 
 
 
254 aa  79.3  0.00000000000005  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3404  short-chain dehydrogenase/reductase SDR  27.36 
 
 
257 aa  79.3  0.00000000000005  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.102605 
 
 
-
 
NC_013526  Tter_2773  short-chain dehydrogenase/reductase SDR  31.44 
 
 
253 aa  79.3  0.00000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_12720  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  26.26 
 
 
262 aa  79  0.00000000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2097  oxidoreductase, short chain dehydrogenase/reductase family  31.84 
 
 
249 aa  79  0.00000000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0368454  n/a   
 
 
-
 
NC_009052  Sbal_3471  short chain dehydrogenase  32.8 
 
 
254 aa  78.6  0.00000000000008  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0422  sorbitol-6-phosphate dehydrogenase  29.5 
 
 
265 aa  78.6  0.00000000000008  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0026318  n/a   
 
 
-
 
NC_014148  Plim_2217  short-chain dehydrogenase/reductase SDR  30.45 
 
 
253 aa  78.6  0.00000000000008  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0335723  n/a   
 
 
-
 
NC_013947  Snas_3305  short-chain dehydrogenase/reductase SDR  31.67 
 
 
248 aa  78.6  0.00000000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.225373  normal 
 
 
-
 
NC_011663  Sbal223_0890  short chain dehydrogenase  32.8 
 
 
254 aa  78.6  0.00000000000009  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0947  gluconate 5-dehydrogenase oxidoreductase protein  30.3 
 
 
258 aa  77.8  0.0000000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.815693 
 
 
-
 
NC_009665  Shew185_0865  short chain dehydrogenase  32.8 
 
 
254 aa  77.8  0.0000000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
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