Gene Mchl_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4178 
Symbol 
ID7115303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4405067 
End bp4405768 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content72% 
IMG OID643526892 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002422900 
Protein GI218532084 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.585089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.589272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCGA CCTACCAGCG CGCCCTGATC GTCGGTGCCG GCCCCGGCCT GAGCGCCTCG 
CTGGCGCGCC TGTTCGCGGC CGAGGGTCTG AAGGTCGGGC TCGCCGCGCG CAACACCGAA
AAACTCAACG ACCTCGCCGC GGAGACGGGG GCCGTCATCC ATGCCTGCGA TGCCACCGAC
CCAAGTGCGG TCGAGGCCCT GTTCCCCCGG CTCGAACCGG CGCTCGGCGG TGCGCCGGAC
GTGGTGGTCT ACAATGCCAG CGGACGGCTG CGCGGGGCCA CCGTTGATCT CGATCCGGAG
GCGGTGGCCC GCGCCCTCTC GGTCTCGGCC TATGGCGGCT TCCTCGTGGC GCAGGCCGCC
GCCCGGCGGA TGCTGCCCCA CCGCCACGGC GCGATCCTGT TCACCGGTGC CTCGGCGAGC
GTAAAGGGAT TTGCGGGCTC GGCCCCCTTC GCCATGGGCA AGTTCGCCCT GCGCGGCCTC
GCGCAGAGCC TTGCCCGGGA GCTTCAGCCC CAGGGCATCC ATGTCGCCCA TGTCGTGATC
GACGGCGCCA TCCGCTCCGC CGCCCGGCCT GATCCAGAGG ACCATCCCGA CGCGACCCTC
GATCCGGACG CCATCGCGAA GGGCTACCTC GCCCTCCTGC GCCAGGATCG CAGCGCCTGG
ACCAACGAGA TCACCCTGCG GCCGTGGGTC GAGCGCTTTT GA
 
Protein sequence
MVPTYQRALI VGAGPGLSAS LARLFAAEGL KVGLAARNTE KLNDLAAETG AVIHACDATD 
PSAVEALFPR LEPALGGAPD VVVYNASGRL RGATVDLDPE AVARALSVSA YGGFLVAQAA
ARRMLPHRHG AILFTGASAS VKGFAGSAPF AMGKFALRGL AQSLARELQP QGIHVAHVVI
DGAIRSAARP DPEDHPDATL DPDAIAKGYL ALLRQDRSAW TNEITLRPWV ERF