More than 300 homologs were found in PanDaTox collection
for query gene Caul_5258 on replicon NC_010335
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010335  Caul_5258  short-chain dehydrogenase/reductase SDR  100 
 
 
247 aa  494  1e-139  Caulobacter sp. K31  Bacteria  normal  hitchhiker  0.000237685 
 
 
-
 
NC_007925  RPC_0017  short-chain dehydrogenase/reductase SDR  73.28 
 
 
245 aa  368  1e-101  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0314  putative acetoin(diacetyl) reductase  73.28 
 
 
245 aa  365  1e-100  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.417582  normal  0.615312 
 
 
-
 
NC_011004  Rpal_0022  short-chain dehydrogenase/reductase SDR  73.68 
 
 
245 aa  367  1e-100  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0019  short-chain dehydrogenase/reductase SDR  71.66 
 
 
245 aa  357  9.999999999999999e-98  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5150  putative short-chain dehydrogenase/reductase SDR  70.04 
 
 
245 aa  352  5e-96  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.855408  normal  0.11304 
 
 
-
 
NC_007958  RPD_0728  short-chain dehydrogenase/reductase SDR  70.04 
 
 
245 aa  349  2e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.167282  normal  0.978745 
 
 
-
 
NC_008347  Mmar10_2560  short-chain dehydrogenase/reductase SDR  67.74 
 
 
248 aa  335  5.999999999999999e-91  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4197  short-chain dehydrogenase/reductase SDR  53.31 
 
 
298 aa  260  1e-68  Cupriavidus metallidurans CH34  Bacteria  normal  0.18326  normal 
 
 
-
 
NC_010002  Daci_5357  short-chain dehydrogenase/reductase SDR  54.44 
 
 
242 aa  259  2e-68  Delftia acidovorans SPH-1  Bacteria  normal  0.735069  normal 
 
 
-
 
NC_009719  Plav_3651  short-chain dehydrogenase/reductase SDR  52.02 
 
 
242 aa  258  6e-68  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.100527  hitchhiker  0.00000000000000573842 
 
 
-
 
NC_009656  PSPA7_0192  putative short chain dehydrogenase  49.6 
 
 
242 aa  247  1e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6063  Short-chain dehydrogenase/reductase SDR  50.2 
 
 
244 aa  244  8e-64  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_01430  putative short chain dehydrogenase  49.19 
 
 
242 aa  242  3e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3907  Short-chain dehydrogenase/reductase SDR  52.7 
 
 
242 aa  241  6e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.180445  normal 
 
 
-
 
NC_009512  Pput_2809  short-chain dehydrogenase/reductase SDR  51.61 
 
 
243 aa  239  2.9999999999999997e-62  Pseudomonas putida F1  Bacteria  normal  0.477245  normal  0.933916 
 
 
-
 
NC_012791  Vapar_0817  short-chain dehydrogenase/reductase SDR  50.61 
 
 
270 aa  239  2.9999999999999997e-62  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6052  Short-chain dehydrogenase/reductase SDR  52.72 
 
 
244 aa  238  5e-62  Ralstonia eutropha JMP134  Bacteria  normal  0.110774  n/a   
 
 
-
 
NC_002947  PP_2881  short chain dehydrogenase/reductase family oxidoreductase  51.21 
 
 
243 aa  237  2e-61  Pseudomonas putida KT2440  Bacteria  normal  0.959841  normal  0.948307 
 
 
-
 
NC_007348  Reut_B4725  Short-chain dehydrogenase/reductase SDR  51.88 
 
 
246 aa  236  3e-61  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2901  short-chain dehydrogenase/reductase SDR  50.81 
 
 
243 aa  235  4e-61  Pseudomonas putida GB-1  Bacteria  normal  0.997812  normal 
 
 
-
 
NC_010815  Glov_3712  short-chain dehydrogenase/reductase SDR  51.46 
 
 
244 aa  234  9e-61  Geobacter lovleyi SZ  Bacteria  normal  normal  0.0912876 
 
 
-
 
NC_010501  PputW619_2385  short-chain dehydrogenase/reductase SDR  50.81 
 
 
243 aa  233  2.0000000000000002e-60  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2625  short-chain dehydrogenase/reductase SDR  51.82 
 
 
243 aa  233  3e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.720898 
 
 
-
 
NC_012792  Vapar_5354  short-chain dehydrogenase/reductase SDR  50.63 
 
 
246 aa  225  6e-58  Variovorax paradoxus S110  Bacteria  normal  0.495414  n/a   
 
 
-
 
NC_008048  Sala_0501  short-chain dehydrogenase/reductase SDR  51.04 
 
 
243 aa  212  3.9999999999999995e-54  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.824433 
 
 
-
 
NC_007953  Bxe_C0125  putative short-chain dehydrogenase  42.67 
 
 
251 aa  179  4e-44  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1232  short-chain dehydrogenase/reductase SDR  42.29 
 
 
246 aa  169  5e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1429  putative short chain dehydrogenase  39.11 
 
 
255 aa  167  1e-40  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0142778 
 
 
-
 
NC_009720  Xaut_4300  short-chain dehydrogenase/reductase SDR  40.5 
 
 
231 aa  164  2.0000000000000002e-39  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2480  short-chain dehydrogenase/reductase SDR  44 
 
 
246 aa  161  1e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0431623 
 
 
-
 
NC_008825  Mpe_A0908  short chain dehydrogenase/reductase family oxidoreductase  37.39 
 
 
246 aa  158  9e-38  Methylibium petroleiphilum PM1  Bacteria  normal  0.700496  normal 
 
 
-
 
NC_008148  Rxyl_3013  short-chain dehydrogenase/reductase SDR  39.58 
 
 
236 aa  157  1e-37  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4172  short-chain dehydrogenase/reductase SDR  36 
 
 
246 aa  154  1e-36  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1425  short-chain dehydrogenase/reductase SDR  39.5 
 
 
236 aa  152  4e-36  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0211  short-chain dehydrogenase/reductase SDR  39.51 
 
 
233 aa  149  3e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0714  short chain dehydrogenase/reductase family oxidoreductase  38.25 
 
 
258 aa  149  4e-35  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1712  short chain dehydrogenase/reductase family oxidoreductase  38.25 
 
 
258 aa  149  4e-35  Burkholderia mallei NCTC 10247  Bacteria  normal  0.595621  n/a   
 
 
-
 
NC_008835  BMA10229_0749  short chain dehydrogenase/reductase family oxidoreductase  38.25 
 
 
258 aa  149  4e-35  Burkholderia mallei NCTC 10229  Bacteria  normal  0.66118  n/a   
 
 
-
 
NC_009075  BURPS668_A1240  short chain dehydrogenase/reductase family oxidoreductase  38.25 
 
 
258 aa  149  5e-35  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1166  short chain dehydrogenase/reductase family oxidoreductase  37.93 
 
 
253 aa  149  5e-35  Burkholderia pseudomallei 1106a  Bacteria  normal  0.932986  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2436  short chain dehydrogenase/reductase family oxidoreductase  37.9 
 
 
292 aa  148  8e-35  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7134  putative 3-oxoacyl-(acyl-carrier-protein) reductase  37.24 
 
 
233 aa  147  1.0000000000000001e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.269687  normal 
 
 
-
 
NC_007413  Ava_4758  Short-chain dehydrogenase/reductase SDR  36.82 
 
 
229 aa  147  2.0000000000000003e-34  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000972291  normal 
 
 
-
 
NC_009719  Plav_1663  short-chain dehydrogenase/reductase SDR  35.1 
 
 
242 aa  146  3e-34  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.73156 
 
 
-
 
NC_010676  Bphyt_5693  short-chain dehydrogenase/reductase SDR  35.77 
 
 
232 aa  142  6e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.406883 
 
 
-
 
NC_007650  BTH_II1562  short chain dehydrogenase/reductase family oxidoreductase  37.5 
 
 
278 aa  140  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4178  short-chain dehydrogenase/reductase SDR  36.93 
 
 
233 aa  138  7e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.585089  normal  0.589272 
 
 
-
 
NC_010172  Mext_3869  short-chain dehydrogenase/reductase SDR  36.51 
 
 
233 aa  135  7.000000000000001e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0675753 
 
 
-
 
NC_010725  Mpop_4325  short-chain dehydrogenase/reductase SDR  37.34 
 
 
233 aa  134  9.999999999999999e-31  Methylobacterium populi BJ001  Bacteria  normal  0.32958  normal 
 
 
-
 
NC_010505  Mrad2831_0073  short-chain dehydrogenase/reductase SDR  37.08 
 
 
234 aa  133  3e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.623849  normal 
 
 
-
 
BN001306  ANIA_03293  conserved hypothetical protein  32.66 
 
 
264 aa  132  6.999999999999999e-30  Aspergillus nidulans FGSC A4  Eukaryota  normal  hitchhiker  0.00545103 
 
 
-
 
NC_012850  Rleg_0240  short-chain dehydrogenase/reductase SDR  36.1 
 
 
233 aa  132  6.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.377738  normal 
 
 
-
 
BN001306  ANIA_02694  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G14000)  32.52 
 
 
243 aa  131  1.0000000000000001e-29  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_010335  Caul_5092  short-chain dehydrogenase/reductase SDR  38.87 
 
 
251 aa  128  8.000000000000001e-29  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3591  short-chain dehydrogenase/reductase SDR  32.22 
 
 
233 aa  120  1.9999999999999998e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.286182  normal 
 
 
-
 
NC_013743  Htur_2193  short-chain dehydrogenase/reductase SDR  33.06 
 
 
233 aa  117  9.999999999999999e-26  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009719  Plav_3648  short-chain dehydrogenase/reductase SDR  31.38 
 
 
233 aa  112  5e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.325516  hitchhiker  0.000000000000965184 
 
 
-
 
NC_011677  PHATRDRAFT_20677  predicted protein  30.29 
 
 
236 aa  103  3e-21  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.732911  n/a   
 
 
-
 
NC_010512  Bcenmc03_6034  short-chain dehydrogenase/reductase SDR  27.43 
 
 
249 aa  87.8  1e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311099  normal  0.357873 
 
 
-
 
NC_008392  Bamb_5653  short-chain dehydrogenase/reductase SDR  27.43 
 
 
251 aa  87.8  1e-16  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.383425 
 
 
-
 
NC_008544  Bcen2424_6443  short-chain dehydrogenase/reductase SDR  27.43 
 
 
259 aa  87.8  1e-16  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0150364  normal 
 
 
-
 
NC_008060  Bcen_1386  short-chain dehydrogenase/reductase SDR  27.43 
 
 
251 aa  87.8  2e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2690  short chain dehydrogenase  33.73 
 
 
255 aa  87.4  2e-16  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6401  short-chain dehydrogenase/reductase SDR  27.43 
 
 
249 aa  86.7  3e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  0.476786  normal  0.058074 
 
 
-
 
NC_006679  CNJ00930  conserved hypothetical protein  27.38 
 
 
252 aa  82  0.000000000000008  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4414  short-chain dehydrogenase/reductase SDR  36.09 
 
 
262 aa  82  0.000000000000008  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4795  short-chain dehydrogenase/reductase SDR  36.09 
 
 
262 aa  82  0.000000000000008  Mycobacterium sp. JLS  Bacteria  normal  normal  0.368954 
 
 
-
 
NC_008705  Mkms_4501  short-chain dehydrogenase/reductase SDR  36.09 
 
 
262 aa  82  0.000000000000008  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1220  short chain dehydrogenase  34.98 
 
 
254 aa  82  0.000000000000008  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0140677 
 
 
-
 
NC_012850  Rleg_4626  short chain dehydrogenase  33.19 
 
 
254 aa  80.9  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.130325  normal  0.180414 
 
 
-
 
NC_013037  Dfer_0269  short-chain dehydrogenase/reductase SDR  30.34 
 
 
249 aa  79.7  0.00000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.523448  normal  0.530069 
 
 
-
 
NC_013205  Aaci_1344  3-oxoacyl-(acyl-carrier-protein) reductase  33.68 
 
 
246 aa  79.3  0.00000000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.118162  n/a   
 
 
-
 
NC_010087  Bmul_5439  short-chain dehydrogenase/reductase SDR  27 
 
 
249 aa  79  0.00000000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.012898 
 
 
-
 
NC_010512  Bcenmc03_6840  short-chain dehydrogenase/reductase SDR  33.67 
 
 
254 aa  78.6  0.00000000000008  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1494  short chain dehydrogenase  32.05 
 
 
255 aa  78.2  0.0000000000001  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000180405  n/a   
 
 
-
 
NC_008726  Mvan_4971  short-chain dehydrogenase/reductase SDR  34.3 
 
 
262 aa  78.2  0.0000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.143414  normal 
 
 
-
 
NC_011369  Rleg2_4356  short chain dehydrogenase  32.03 
 
 
254 aa  77.8  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.146165 
 
 
-
 
NC_009338  Mflv_1776  short-chain dehydrogenase/reductase SDR  33.72 
 
 
262 aa  77.4  0.0000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.869283 
 
 
-
 
NC_009565  TBFG_10780  short chain dehydrogenase  33.53 
 
 
275 aa  77  0.0000000000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  30.99 
 
 
248 aa  76.3  0.0000000000005  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_010725  Mpop_1226  short-chain dehydrogenase/reductase SDR  25.41 
 
 
247 aa  75.9  0.0000000000005  Methylobacterium populi BJ001  Bacteria  normal  0.340445  normal  0.365193 
 
 
-
 
NC_008347  Mmar10_2673  short-chain dehydrogenase/reductase SDR  30.09 
 
 
253 aa  75.9  0.0000000000005  Maricaulis maris MCS10  Bacteria  normal  0.381753  normal 
 
 
-
 
NC_011894  Mnod_3075  short-chain dehydrogenase/reductase SDR  27.92 
 
 
261 aa  75.9  0.0000000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_3804  short-chain dehydrogenase/reductase SDR  29.96 
 
 
271 aa  75.5  0.0000000000007  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4881  short-chain dehydrogenase/reductase SDR  29.96 
 
 
271 aa  75.5  0.0000000000007  Ralstonia pickettii 12J  Bacteria  normal  0.169206  normal  0.0484523 
 
 
-
 
NC_008782  Ajs_0231  short-chain dehydrogenase/reductase SDR  32.52 
 
 
258 aa  75.1  0.0000000000009  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0422  sorbitol-6-phosphate dehydrogenase  28.25 
 
 
265 aa  74.7  0.000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0026318  n/a   
 
 
-
 
NC_008148  Rxyl_3047  short-chain dehydrogenase/reductase SDR  28.32 
 
 
262 aa  74.7  0.000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2301  3-oxoacyl-(acyl-carrier-protein) reductase  27.65 
 
 
240 aa  75.1  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00343552  hitchhiker  0.00100829 
 
 
-
 
NC_010622  Bphy_0342  short-chain dehydrogenase/reductase SDR  33.15 
 
 
247 aa  74.7  0.000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.973802  normal 
 
 
-
 
NC_007498  Pcar_1438  3-oxoacyl-(acyl-carrier-protein) reductase  30.68 
 
 
245 aa  74.3  0.000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_22340  3-oxoacyl-(acyl-carrier-protein) reductase  27.65 
 
 
234 aa  73.9  0.000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0129357  normal 
 
 
-
 
NC_007951  Bxe_A2692  short chain dehydrogenase  34.25 
 
 
246 aa  73.6  0.000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.843441 
 
 
-
 
NC_010338  Caul_0993  short-chain dehydrogenase/reductase SDR  34.81 
 
 
246 aa  74.3  0.000000000002  Caulobacter sp. K31  Bacteria  normal  normal  0.934127 
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  31.03 
 
 
259 aa  74.3  0.000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  27.07 
 
 
239 aa  73.9  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_010623  Bphy_5045  short chain dehydrogenase  33.14 
 
 
254 aa  73.2  0.000000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3095  3-oxoacyl-[acyl-carrier-protein] reductase  27.37 
 
 
246 aa  73.6  0.000000000003  Burkholderia sp. 383  Bacteria  normal  normal  0.025547 
 
 
-
 
NC_011369  Rleg2_2039  short chain dehydrogenase  35.57 
 
 
255 aa  73.6  0.000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0111409  normal 
 
 
-
 
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