Gene Mnod_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3075 
Symbol 
ID7304002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3172935 
End bp3173720 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content67% 
IMG OID643600774 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002498319 
Protein GI220923017 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACGC CTCAAACAGT GCTGGTAACT GGGGGAGCTT CCGGCATTGG CTTCGCGATC 
GTCGAAGCCG TGCTGGCCGA GGGCTGGCGT GCGATCGTCG CCGACCTCGA TCAGAGGAGC
CTCGACCGGG CCCGTGACGC CTTCGGCAGC CGAGCTGATG TCCGCCTCGA AGCTCTGAAC
GTCACGGACG AGGAGGCGGT CACGCGCTCG ATCGCGGCAT GTGAGGCGGA ATTCGGACCG
CTCACGGGCG TCGTCAACTC CGCCGGGATC GGCAGGGATG TGCCCGCGCT GGAAACGAGC
ACGGACCTGT TCCGCACAAT CGTCGAGGTC AACCTCATCG GCAGCTTCGT CGTGTCGCGC
GAGGCCGCCA AGCGCATGGC GCTGCGCGGA CGCGGTGCGA TCCTCAACAT CGCGTCCGTC
TCCGGCATCA TGGGCAATGC CGGACGGACT GCCTACGGCG CTTCCAAAGG CGGGCAGATC
ACGATGACCA AGGTCATGGC CGTCGACCTC GCCCCGCTCG GGATCCGGGT CAACGCGATC
GCGCCGGGTC CGATCGAGAC GCCCATGGCG CAGGAGATGC ACACGGAGCA GACCCGCGGC
GCTTGGCTGT CCACGGTCCC GCAACGCCGG TACGGAACGC CGGCGGAAAT CGCCGCGGCT
GCGATCTTCC TCCTCGATGA GCAGAAGTCG AGCTTCATCA CTGGACAGAC GCTCTGCGTC
GACGGTGGCT TCACCGTCGC CGGCATCATC GGCCAGCCCA CGGCGGCTGT GCCCGCAGCA
GCTTAG
 
Protein sequence
MPTPQTVLVT GGASGIGFAI VEAVLAEGWR AIVADLDQRS LDRARDAFGS RADVRLEALN 
VTDEEAVTRS IAACEAEFGP LTGVVNSAGI GRDVPALETS TDLFRTIVEV NLIGSFVVSR
EAAKRMALRG RGAILNIASV SGIMGNAGRT AYGASKGGQI TMTKVMAVDL APLGIRVNAI
APGPIETPMA QEMHTEQTRG AWLSTVPQRR YGTPAEIAAA AIFLLDEQKS SFITGQTLCV
DGGFTVAGII GQPTAAVPAA A