| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0231 |
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| Symbol | |
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| ID | 4672092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 246821 |
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| End bp | 247597 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639837362 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_984561 |
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| Protein GI | 121592665 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAACG ACGTGATGCA ACGCTTTCGC CTGAACGGCA AGCGCGTGCT GGTGACCGGC
GCCTCCAGCG GGCTGGGGCA GCACTTTGCC CGCCTGCTGG CGGCGCAGGG CGCCCAGGTG
GCGTTGGCGG CGCGCCGCAC CGACAAGCTG CAGGGCACGG TGGACGACAT CAACGCCGCA
GGCGGCCAGG CGCGGGCCTG CGCGCTGGAC GTGACCGACA GCGCCAGCGT GCGCGCCTGC
TTCGATGATC TGGCCGACTG GGGCGTGCCC GACGTGGTCA TCAACAACGC CGGCGTGACC
GTGACGCGCC CCCTGCTGGA GCAGACCGAG GCCGACTTCG ACCAGGTGCT GGACACCAAC
CTCAAGGGCT GCTGGCTGGT GGCCACCGAG GCCGCCCGCC GCATGGTGGT GGCGGGCAAG
GGCGGCTCAG TCGTCAACGT GGCGTCCATA TTGGGCGAGC GCGTGGCGGG CGGCGTGGCA
CCCTATGCCA TATCGAAAGC CGGCGTGATC CAGGCCACCA AGGCCATGGC GCTGGAGCTG
GCGCGCCACC GCATCCGCGT GAACGCGCTG CTGCCCGGCT ATGTGGTGAC CGACCTCAAT
CGCGACTTTC TGGCCAGCGA GGCGGGCGAC AAGCTGCGCA GCCGCATCCC CAGCCGCCGC
TTTGGCGAGC TGAGCGACCT GGACGGCCCG CTGCTGCTGC TGGCCAGCGA TGCGGGCGCC
GCCATGTCGG GCGCCACGGT GGCGGTCGAC GGCGCGCACC TGGTGAGTTC GCTATGA
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| Protein sequence | MDNDVMQRFR LNGKRVLVTG ASSGLGQHFA RLLAAQGAQV ALAARRTDKL QGTVDDINAA
GGQARACALD VTDSASVRAC FDDLADWGVP DVVINNAGVT VTRPLLEQTE ADFDQVLDTN
LKGCWLVATE AARRMVVAGK GGSVVNVASI LGERVAGGVA PYAISKAGVI QATKAMALEL
ARHRIRVNAL LPGYVVTDLN RDFLASEAGD KLRSRIPSRR FGELSDLDGP LLLLASDAGA
AMSGATVAVD GAHLVSSL
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