| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6840 |
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| Symbol | |
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| ID | 6125752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 938776 |
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| End bp | 939540 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641647847 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001774439 |
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| Protein GI | 170735325 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR03206] 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGGC TCAAGGAGAA GGTCGTCGTC GTCACCGGCG CCGCGGGCGG GATCGGAACC
GCGATCAGCA AACGATTCGG CGAGGAAGGC TCGACGGTCG CGCTGTTCGA CCTGAACGAA
GAAGGCGCTG CGCGTGTCGC GGCGGAAATC GAGGCGGCAG GGGGCAAGGC GCGTGCGTAC
CGCGTCGACA TCACGGATCA CGAAGGCGTG CATGCCGCAG TAGCAAAAGT CGAGGAGGAA
CTTGGTCCGA TCGACGTTCT CGTCAACAAC GCCGGCTGGG ACATGGGGGC TTTCTTCCTG
CAAACCGAGA AACCGTTCTG GGACAAAGTC GTTGCGATCA ATCTGTACGG TCCGCTGAAC
ATGCACCATG CCGTGCTGCG GCGCATGGCC GAACGCGGTC GTGGCCGCGT CGTCAACATT
TCGTCGGATG CCGGGCGCGT GGGCTCTTCG ATGGAAGCGG TGTACTCGTT CTGCAAAGGC
GGCCTGATCG CATTCACGAA GACGATGGCG CGCGAGATGG CCCGCCAGCA GATTCCCGTC
AACGTCGTCT GCCCCGGCCC CACCGCCACC CCGCTGCTCG ACAATCTCGC GCAAGGCGAG
AAAGGCGAGC GCATCAAGGC CGCGCTCGTC AAGGCCGTAC CGTTCGGCCG GATGGGCGAG
CCTGGCGACA TCCCCGGCGC GGTGGCCTTC CTCGCAAGCG ACGACGCCGC TTTCATCAGC
GGCCAAGTCA TCAGCGTCTC CGGCGGTCTG ACGATGGCCG GCTAA
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| Protein sequence | MKGLKEKVVV VTGAAGGIGT AISKRFGEEG STVALFDLNE EGAARVAAEI EAAGGKARAY
RVDITDHEGV HAAVAKVEEE LGPIDVLVNN AGWDMGAFFL QTEKPFWDKV VAINLYGPLN
MHHAVLRRMA ERGRGRVVNI SSDAGRVGSS MEAVYSFCKG GLIAFTKTMA REMARQQIPV
NVVCPGPTAT PLLDNLAQGE KGERIKAALV KAVPFGRMGE PGDIPGAVAF LASDDAAFIS
GQVISVSGGL TMAG
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