Gene Namu_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2301 
Symbol 
ID8447912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2542308 
End bp2543030 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID645041423 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003201667 
Protein GI258652511 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00343552 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00100829 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGCAAG CACCCGCAAC CGGGCGATCG GCGCTGGTGA CCGGTGGCAA CCGGGGAATC 
GGGTTGGCCA TCGCCCGGGC CCTGGCCGCC GACGGTCATC GGGTGACGGT CACCCATCGT
TCCGGGGAGC CCCCGCAGGG GCTGTCCGGA GTCATCTGCG ACGTGACCGA CGCGGCCAGC
ATCGACGCCG CGTTCAGCCA GGTCGAGGCC GATCAGGGGC CGGTGGAGAT CCTGGTCGCC
AACGCCGGCA TCACCGACGA CACGCTGCTG CTGCGGATGA GCGAGGACAC CTTCACCTCG
GTGGTGGACG CCAACCTGAC CGGCGCCTAC CGGGTGGCCA AGCGGGCCGC GTCCGGCATG
CTGCGCAAGC GCTGGGGGCG GATGATCTTC ATCTCCTCCG TGGTCGGGCT GTCCGGCGGG
GCCGGGCAGG CCAACTACTC GGCGTCCAAG GCCGGCCTGG TCGGCCTGGC CCGCTCGATC
GCCCGCGAAC TGGGCTCGCG CCACATCACC GCCAACGTGA TCGCCCCCGG ATTCGTCGAT
ACCGACATGA CGCAGTCCCT GCCCGAGGCC CGGCGCACCG AGATCGTCAA CCAGGTGCCG
TTGAAGCGGT ACGCGGAGCC GTCCGAGATC GCCGACGCCG TCGCCTTCCT GGCCTCCGAT
CGGGCCGCCT ACATCACCGG CGCGGTCCTG CCGGTCGACG GTGGCCTGGG CATGGGCCAC
TGA
 
Protein sequence
MTQAPATGRS ALVTGGNRGI GLAIARALAA DGHRVTVTHR SGEPPQGLSG VICDVTDAAS 
IDAAFSQVEA DQGPVEILVA NAGITDDTLL LRMSEDTFTS VVDANLTGAY RVAKRAASGM
LRKRWGRMIF ISSVVGLSGG AGQANYSASK AGLVGLARSI ARELGSRHIT ANVIAPGFVD
TDMTQSLPEA RRTEIVNQVP LKRYAEPSEI ADAVAFLASD RAAYITGAVL PVDGGLGMGH