Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2301 |
Symbol | |
ID | 8447912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2542308 |
End bp | 2543030 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645041423 |
Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
Protein accession | YP_003201667 |
Protein GI | 258652511 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00343552 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00100829 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGCAAG CACCCGCAAC CGGGCGATCG GCGCTGGTGA CCGGTGGCAA CCGGGGAATC GGGTTGGCCA TCGCCCGGGC CCTGGCCGCC GACGGTCATC GGGTGACGGT CACCCATCGT TCCGGGGAGC CCCCGCAGGG GCTGTCCGGA GTCATCTGCG ACGTGACCGA CGCGGCCAGC ATCGACGCCG CGTTCAGCCA GGTCGAGGCC GATCAGGGGC CGGTGGAGAT CCTGGTCGCC AACGCCGGCA TCACCGACGA CACGCTGCTG CTGCGGATGA GCGAGGACAC CTTCACCTCG GTGGTGGACG CCAACCTGAC CGGCGCCTAC CGGGTGGCCA AGCGGGCCGC GTCCGGCATG CTGCGCAAGC GCTGGGGGCG GATGATCTTC ATCTCCTCCG TGGTCGGGCT GTCCGGCGGG GCCGGGCAGG CCAACTACTC GGCGTCCAAG GCCGGCCTGG TCGGCCTGGC CCGCTCGATC GCCCGCGAAC TGGGCTCGCG CCACATCACC GCCAACGTGA TCGCCCCCGG ATTCGTCGAT ACCGACATGA CGCAGTCCCT GCCCGAGGCC CGGCGCACCG AGATCGTCAA CCAGGTGCCG TTGAAGCGGT ACGCGGAGCC GTCCGAGATC GCCGACGCCG TCGCCTTCCT GGCCTCCGAT CGGGCCGCCT ACATCACCGG CGCGGTCCTG CCGGTCGACG GTGGCCTGGG CATGGGCCAC TGA
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Protein sequence | MTQAPATGRS ALVTGGNRGI GLAIARALAA DGHRVTVTHR SGEPPQGLSG VICDVTDAAS IDAAFSQVEA DQGPVEILVA NAGITDDTLL LRMSEDTFTS VVDANLTGAY RVAKRAASGM LRKRWGRMIF ISSVVGLSGG AGQANYSASK AGLVGLARSI ARELGSRHIT ANVIAPGFVD TDMTQSLPEA RRTEIVNQVP LKRYAEPSEI ADAVAFLASD RAAYITGAVL PVDGGLGMGH
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