| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7237 |
|---|
| Symbol | |
|---|
| ID | 8670549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7988487 |
|---|
| End bp | 7989146 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003342670 |
|---|
| Protein GI | 271968474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.154876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGTG CCGTGATCAT TGGTGCAGGT CCGGGGATCG GACAGGCGGT GGCTCGTCGG
TTCGCCAGGG AAGGGCTGCC GATCGTGCTG ATCGCCCGGA GCGCCCGGAC GTTGCGTGCA
GCGGCCAAGG CGGTTGCTCC CAGTGATGTC CCAGTTGTCA CGTTGGAGGC CGATAGCACC
GACCAGGCCG GGTTGAACGC CGCGCTCGAC GAGGCTGTCC GCGAGTACGG TGTGCCGGAC
GTCGTCGTTT ACAACGCCGC GATCATCCAG GCGGACGCGC CGGGCGAGCT GTCGGTACGC
GGCCACATGG AGGCCTGGGC GGTGAACGTG GTCGGCGCGC TCAACGCCGC GGCTCACGTC
GCGCCCGCCA TGGCGGCACG CGGGCATGGA ACGATCCTCA TCACCGGCGG CATGCCCGAG
CCCAAGCCGC AGTATGTGAG CCTCTCCCTG GGCAAGGCAG GTGTCCGTAC CCTGGTCACG
CTGCTCGACC AAGAGTACGG CCCGGCCGGA GTGCACGTGG CGAGCGTCAC CGTGGACGGT
CCGGTCGCAC CTGGCACCGA CTTCGACCCA GACGACATCG CCGAGCACTA CTGGCATCTG
CACACGCAGC CACGACACCA GTGGACGCGG GAAGCTCTGC ACGCAGGTTC CTCGCGATGA
|
|---|
| Protein sequence | MSSAVIIGAG PGIGQAVARR FAREGLPIVL IARSARTLRA AAKAVAPSDV PVVTLEADST
DQAGLNAALD EAVREYGVPD VVVYNAAIIQ ADAPGELSVR GHMEAWAVNV VGALNAAAHV
APAMAARGHG TILITGGMPE PKPQYVSLSL GKAGVRTLVT LLDQEYGPAG VHVASVTVDG
PVAPGTDFDP DDIAEHYWHL HTQPRHQWTR EALHAGSSR
|
|---|
| |