| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6256 |
|---|
| Symbol | |
|---|
| ID | 8016127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012852 |
|---|
| Strand | - |
|---|
| Start bp | 321453 |
|---|
| End bp | 322181 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644827559 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002978759 |
|---|
| Protein GI | 241258875 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.88898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGATC TCATGAAAGG CAAGGTTGCC GCCATTACGG GTGCCGCATC GGGCATCGGT
TTGGAATGTG CGCGCAGCCT CCACGCCGCA GGTGTAACGG TCGTGCTCAT CGACCGCGCC
AAGGACAAGC TCGAAGCTCT TTGCAAGGAG ATCGGCAGAG GCGCTCTGCC GCTCGTCATC
GATCTTCTCG ATGGAAAGCA GGTCTCGGGC ATATTGCCTC GCATTCTTGA CGTGGCCGGC
GGGCTCGACA TCCTCCACGC CAATGCCGGC GCCTATATTG GCGGTCCCGT TGTCGATGGC
GATCCGGATG CCTGGGACCG CATGCTCAAC CTCAACATCA ACGCAGCCTT CCGCTCGGTC
AATGCGGTGC TGCCGCAGAT GGTTGCCCAG AAGTCCGGCG ACATCCTGTT TACGAGCTCG
ATCGCAGGCG TCGTGCCGGT CGCGTGGGAG CCGATCTACA CAGCCTCGAA ATTCGCAGTT
CAGGCCTTCG TCCATTCCAC GCGCCGGCAA GTGGCGCAGC ACGGCGTGCG CGTCGGTGCG
GTGCTGCCAG GACCTGTCGT CACGGCCTTG CTCGACGACT GGCCGAAGGC GAAAATGGAG
GAAGCGCTGG CCAATGGCAG CCTGATGCAG CCGAAAGAAG TGGCCGACGC CGTCCTTTTC
ATGCTGTCGC GACCGCGTAA TGTGACTGTC CGCGATCTTG TGATTCTGCC GAATAGCGTG
GATCTGTAA
|
|---|
| Protein sequence | MTDLMKGKVA AITGAASGIG LECARSLHAA GVTVVLIDRA KDKLEALCKE IGRGALPLVI
DLLDGKQVSG ILPRILDVAG GLDILHANAG AYIGGPVVDG DPDAWDRMLN LNINAAFRSV
NAVLPQMVAQ KSGDILFTSS IAGVVPVAWE PIYTASKFAV QAFVHSTRRQ VAQHGVRVGA
VLPGPVVTAL LDDWPKAKME EALANGSLMQ PKEVADAVLF MLSRPRNVTV RDLVILPNSV
DL
|
|---|
| |