More than 300 homologs were found in PanDaTox collection
for query gene Tfu_1817 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_1817  LuxR response regulator receiver  100 
 
 
236 aa  444  1.0000000000000001e-124  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  57.52 
 
 
234 aa  226  3e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  51.56 
 
 
227 aa  205  6e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.33 
 
 
226 aa  204  1e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  50.88 
 
 
226 aa  201  9e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.98 
 
 
239 aa  188  7e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  51.57 
 
 
220 aa  187  9e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  50 
 
 
227 aa  183  2.0000000000000003e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  46.88 
 
 
223 aa  178  5.999999999999999e-44  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  46.15 
 
 
221 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  48.66 
 
 
226 aa  175  6e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  44.74 
 
 
220 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  46.49 
 
 
220 aa  171  6.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  45.25 
 
 
239 aa  169  3e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  43.9 
 
 
250 aa  169  4e-41  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  45.22 
 
 
234 aa  168  5e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  42.29 
 
 
233 aa  169  5e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  47.32 
 
 
230 aa  168  6e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  46.4 
 
 
230 aa  168  7e-41  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.85 
 
 
230 aa  168  9e-41  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  45.65 
 
 
230 aa  166  2e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  44.83 
 
 
227 aa  166  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  44.14 
 
 
224 aa  166  2.9999999999999998e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.22 
 
 
226 aa  166  2.9999999999999998e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  44.59 
 
 
222 aa  166  4e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  45.58 
 
 
230 aa  166  4e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  45.29 
 
 
221 aa  165  5e-40  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  45.33 
 
 
225 aa  165  5e-40  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.39 
 
 
218 aa  164  8e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  45.98 
 
 
225 aa  164  9e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.6 
 
 
229 aa  164  1.0000000000000001e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  44.44 
 
 
224 aa  164  1.0000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.92 
 
 
236 aa  163  2.0000000000000002e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  44.2 
 
 
218 aa  163  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  45.19 
 
 
241 aa  162  3e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  43.5 
 
 
220 aa  162  6e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  45.91 
 
 
234 aa  161  6e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  43.11 
 
 
218 aa  161  7e-39  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  45.21 
 
 
216 aa  161  7e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  40.81 
 
 
224 aa  161  8.000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  45.54 
 
 
224 aa  161  9e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  45.18 
 
 
230 aa  160  1e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  44.39 
 
 
221 aa  160  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  41.33 
 
 
220 aa  160  1e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  45.33 
 
 
222 aa  160  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009953  Sare_2352  two component LuxR family transcriptional regulator  46.85 
 
 
230 aa  161  1e-38  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.139824 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  46.36 
 
 
219 aa  160  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.46 
 
 
241 aa  160  2e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  44.54 
 
 
242 aa  159  3e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  46.19 
 
 
220 aa  159  4e-38  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.84 
 
 
225 aa  159  4e-38  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  45 
 
 
215 aa  159  4e-38  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  47.21 
 
 
224 aa  158  6e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  43.64 
 
 
213 aa  158  7e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  44 
 
 
218 aa  158  7e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  45.81 
 
 
223 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  43.3 
 
 
225 aa  157  1e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  47.09 
 
 
225 aa  157  1e-37  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  41.59 
 
 
221 aa  157  1e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  45.22 
 
 
229 aa  157  1e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  42.34 
 
 
225 aa  157  1e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  45.66 
 
 
224 aa  156  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009380  Strop_2235  regulatory protein, LuxR  45.95 
 
 
231 aa  156  2e-37  Salinispora tropica CNB-440  Bacteria  normal  0.422182  normal 
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  43.84 
 
 
254 aa  156  2e-37  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  47.98 
 
 
220 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  45.78 
 
 
228 aa  156  3e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  43.64 
 
 
214 aa  155  4e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  41.7 
 
 
231 aa  155  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  44.64 
 
 
225 aa  155  5.0000000000000005e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  44.49 
 
 
225 aa  155  6e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  43.83 
 
 
234 aa  155  7e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.243741 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.14 
 
 
225 aa  154  8e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  44.29 
 
 
219 aa  154  8e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  43.89 
 
 
217 aa  154  1e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  44.34 
 
 
220 aa  154  1e-36  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  43.72 
 
 
222 aa  154  1e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.89 
 
 
230 aa  154  1e-36  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  43.12 
 
 
223 aa  154  1e-36  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  46.19 
 
 
215 aa  153  2e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  44.2 
 
 
213 aa  153  2e-36  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  38.84 
 
 
233 aa  153  2e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  43.42 
 
 
225 aa  153  2e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  44.8 
 
 
222 aa  154  2e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  47.06 
 
 
221 aa  152  2.9999999999999998e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  42.67 
 
 
234 aa  152  2.9999999999999998e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  43.95 
 
 
216 aa  152  5.9999999999999996e-36  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  44.14 
 
 
219 aa  151  7e-36  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  42.41 
 
 
228 aa  151  8e-36  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  40.54 
 
 
215 aa  151  8e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  42.53 
 
 
214 aa  151  1e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.81 
 
 
261 aa  151  1e-35  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  42.73 
 
 
230 aa  151  1e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  41.05 
 
 
221 aa  150  1e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  43.24 
 
 
220 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  41.89 
 
 
221 aa  150  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  40.18 
 
 
230 aa  150  2e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  35.54 
 
 
248 aa  149  3e-35  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  43.1 
 
 
239 aa  149  3e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.91 
 
 
244 aa  149  4e-35  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  40.36 
 
 
223 aa  149  4e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
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