64 homologs were found in PanDaTox collection
for query gene Sputcn32_1996 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009438  Sputcn32_1996  response regulator receiver protein  100 
 
 		 78 aa  161  3e-39  Shewanella putrefaciens CN-32  Bacteria  normal  0.0387596  n/a   
 
 
-
 
NC_009052  Sbal_2199  response regulator receiver modulated metal dependent phosphohydrolase  80.77 
 
 		 523 aa  134  5e-31  Shewanella baltica OS155  Bacteria  normal  0.179718  n/a   
 
 
-
 
NC_009035  Sbal_4485  hypothetical protein  80.77 
 
 		 523 aa  134  5e-31  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2212  response regulator receiver modulated metal dependent phosphohydrolase  78.21 
 
 		 523 aa  128  2.0000000000000002e-29  Shewanella baltica OS223  Bacteria  normal  0.16257  normal  0.683218 
 
 
-
 
NC_009997  Sbal195_2222  response regulator receiver modulated metal dependent phosphohydrolase  78.21 
 
 		 523 aa  128  2.0000000000000002e-29  Shewanella baltica OS195  Bacteria  normal  0.151758  normal  0.307874 
 
 
-
 
NC_009665  Shew185_2172  response regulator receiver modulated metal dependent phosphohydrolase  78.21 
 
 		 523 aa  129  2.0000000000000002e-29  Shewanella baltica OS185  Bacteria  normal  0.0465103  n/a   
 
 
-
 
NC_008577  Shewana3_2105  response regulator receiver modulated metal dependent phosphohydrolase  76.92 
 
 		 525 aa  128  2.0000000000000002e-29  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00173233  normal  0.407049 
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  73.08 
 
 		 524 aa  125  3e-28  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_010506  Swoo_2427  response regulator receiver modulated metal dependent phosphohydrolase  71.79 
 
 		 521 aa  120  4e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.219655  hitchhiker  0.000118537 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  69.23 
 
 		 523 aa  120  5e-27  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal  1 
 
 
-
 
NC_009831  Ssed_2209  response regulator receiver modulated metal dependent phosphohydrolase  70.51 
 
 		 526 aa  119  1.9999999999999998e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  0.195398  normal  1 
 
 
-
 
NC_004347  SO_2366  response regulator  69.23 
 
 		 525 aa  117  6e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2004  response regulator receiver modulated metal dependent phosphohydrolase  74.36 
 
 		 525 aa  115  1.9999999999999998e-25  Shewanella sp. MR-4  Bacteria  normal  0.0562345  hitchhiker  0.000000282251 
 
 
-
 
NC_008322  Shewmr7_1971  response regulator receiver modulated metal dependent phosphohydrolase  74.36 
 
 		 525 aa  115  1.9999999999999998e-25  Shewanella sp. MR-7  Bacteria  normal  0.0825869  normal  0.0109864 
 
 
-
 
NC_007954  Sden_1853  metal-dependent phosphohydrolase  65.38 
 
 		 527 aa  78.6  0.00000000000003  Shewanella denitrificans OS217  Bacteria  normal  0.0219327  n/a   
 
 
-
 
NC_011138  MADE_02571  response regulator  61.54 
 
 		 521 aa  75.9  0.0000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2561  response regulator receiver modulated metal dependent phosphohydrolase  45.59 
 
 		 517 aa  68.2  0.00000000004  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00356747  n/a   
 
 
-
 
NC_013173  Dbac_0491  response regulator receiver modulated metal dependent phosphohydrolase  41.18 
 
 		 522 aa  67.8  0.00000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.165576  n/a   
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  52.83 
 
 		 520 aa  67.8  0.00000000005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  46.03 
 
 		 515 aa  67.4  0.00000000006  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03585  response regulator/GGDEF/EAL domain protein  54 
 
 		 741 aa  62.4  0.000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  53.85 
 
 		 523 aa  60.8  0.000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  45.71 
 
 		 513 aa  60.5  0.000000007  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 		 513 aa  60.5  0.000000008  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 		 513 aa  60.5  0.000000008  Shewanella baltica OS195  Bacteria  normal  1  normal  0.152382 
 
 
-
 
NC_011729  PCC7424_4124  response regulator receiver protein  39.44 
 
 		 172 aa  60.1  0.000000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  44.29 
 
 		 513 aa  59.7  0.00000001  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_010002  Daci_3036  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  53.85 
 
 		 758 aa  59.7  0.00000001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.830853 
 
 
-
 
NC_007643  Rru_A1908  response regulator receiver modulated diguanylate cyclase  41.89 
 
 		 519 aa  59.7  0.00000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.11693  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  51.92 
 
 		 536 aa  59.3  0.00000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_2117  histidine kinase  49.02 
 
 		 631 aa  58.9  0.00000002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0208634 
 
 
-
 
NC_011138  MADE_01215  Response regulator  38.24 
 
 		 509 aa  58.9  0.00000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.204793  n/a   
 
 
-
 
NC_011757  Mchl_2394  response regulator receiver sensor signal transduction histidine kinase  49.02 
 
 		 593 aa  58.5  0.00000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_0394  response regulator/GGDEF/EAL domain-containing protein  49.02 
 
 		 740 aa  58.2  0.00000004  Colwellia psychrerythraea 34H  Bacteria  normal  0.273558  n/a   
 
 
-
 
NC_010725  Mpop_2070  response regulator receiver sensor signal transduction histidine kinase  45.1 
 
 		 613 aa  57.8  0.00000005  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  41.82 
 
 		 518 aa  57  0.00000008  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal  1 
 
 
-
 
NC_007778  RPB_4666  response regulator receiver sensor signal transduction histidine kinase  40.62 
 
 		 578 aa  56.2  0.0000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009718  Fnod_1705  response regulator receiver modulated metal dependent phosphohydrolase  40.62 
 
 		 471 aa  56.2  0.0000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_4035  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  40.32 
 
 		 746 aa  55.8  0.0000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.398097  n/a   
 
 
-
 
NC_008576  Mmc1_0401  response regulator receiver sensor signal transduction histidine kinase  37.33 
 
 		 415 aa  53.9  0.0000006  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.653943 
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  44.23 
 
 		 432 aa  54.3  0.0000006  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_0493  response regulator receiver modulated metal dependent phosphohydrolase  38.46 
 
 		 531 aa  52.8  0.000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.366798  n/a   
 
 
-
 
NC_009456  VC0395_1019  putative response regulator  34.85 
 
 		 522 aa  53.1  0.000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0402  response regulator receiver sensor signal transduction histidine kinase  45.1 
 
 		 398 aa  52.8  0.000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.93747  normal  0.145713 
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  38.46 
 
 		 581 aa  51.2  0.000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_0496  putative diguanylate phosphodiesterase  32.88 
 
 		 767 aa  51.6  0.000004  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.788805 
 
 
-
 
NC_008751  Dvul_2880  multi-sensor signal transduction histidine kinase  48 
 
 		 576 aa  51.6  0.000004  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A0131  response regulator receiver (CheY) and unknown domain-containing protein  39.62 
 
 		 337 aa  51.2  0.000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  42.31 
 
 		 582 aa  50.8  0.000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  33.77 
 
 		 579 aa  50.4  0.000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_008576  Mmc1_1813  response regulator receiver modulated metal dependent phosphohydrolase  45.65 
 
 		 512 aa  50.1  0.000009  Magnetococcus sp. MC-1  Bacteria  normal  0.0479529  normal  0.434013 
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  44.23 
 
 		 529 aa  50.1  0.000009  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A0553  response regulator receiver Signal transduction histidine kinase  37.5 
 
 		 440 aa  49.7  0.00001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.580246  n/a   
 
 
-
 
NC_007406  Nwi_3058  phage head-tail adaptor, putative  43.14 
 
 		 580 aa  50.1  0.00001  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00943131  normal  0.0427518 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  40.38 
 
 		 580 aa  49.3  0.00002  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_013173  Dbac_0492  response regulator receiver modulated metal dependent phosphohydrolase  42 
 
 		 508 aa  48.5  0.00003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0844408  n/a   
 
 
-
 
NC_009831  Ssed_1780  response regulator receiver modulated metal dependent phosphohydrolase  47.92 
 
 		 525 aa  48.1  0.00004  Shewanella sediminis HAW-EB3  Bacteria  normal  0.33037  normal  1 
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  40.38 
 
 		 531 aa  48.1  0.00004  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_007958  RPD_4375  response regulator receiver sensor signal transduction histidine kinase  41.67 
 
 		 550 aa  47.8  0.00006  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3287  response regulator receiver sensor signal transduction histidine kinase  40.82 
 
 		 584 aa  46.6  0.0001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847642  normal  1 
 
 
-
 
NC_008752  Aave_2925  diguanylate cyclase/phosphodiesterase / diguanylate cyclase  46.67 
 
 		 743 aa  42.7  0.001  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.249336 
 
 
-
 
NC_007519  Dde_0239  PAS/PAC sensor hybrid histidine kinase  40 
 
 		 565 aa  42.4  0.002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1361  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  34.62 
 
 		 746 aa  41.6  0.004  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_4840  two-component response regulator PilR  37.74 
 
 		 448 aa  40  0.01  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.43512  normal  0.760188 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>