More than 300 homologs were found in PanDaTox collection
for query gene Smed_5322 on replicon NC_009621
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009621  Smed_5322  two component LuxR family transcriptional regulator  100 
 
 		 239 aa  489  1e-137  Sinorhizobium medicae WSM419  Bacteria  normal  0.205756  normal  0.864466 
 
 
-
 
NC_011366  Rleg2_5740  two component transcriptional regulator, LuxR family  90.3 
 
 		 240 aa  443  1.0000000000000001e-124  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.714581  normal  1 
 
 
-
 
NC_012848  Rleg_5411  two component transcriptional regulator, LuxR family  89.54 
 
 		 240 aa  444  1.0000000000000001e-124  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009668  Oant_3907  two component LuxR family transcriptional regulator  80.59 
 
 		 248 aa  394  1e-109  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_3086  two component signal transduction response regulator  44.77 
 
 		 249 aa  198  7e-50  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  31.33 
 
 		 239 aa  93.6  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.377169 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  31.19 
 
 		 210 aa  88.2  1e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  31.12 
 
 		 215 aa  87  3e-16  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  30.2 
 
 		 210 aa  85.5  7e-16  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  32.18 
 
 		 228 aa  84.7  0.000000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  31.11 
 
 		 206 aa  84  0.000000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  30.5 
 
 		 218 aa  83.6  0.000000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  30.2 
 
 		 210 aa  82.8  0.000000000000004  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  28.99 
 
 		 217 aa  83.2  0.000000000000004  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  30.2 
 
 		 210 aa  82.4  0.000000000000005  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  30.2 
 
 		 210 aa  82.4  0.000000000000005  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  30.2 
 
 		 210 aa  82.4  0.000000000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  30.2 
 
 		 210 aa  82.4  0.000000000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  30.2 
 
 		 210 aa  82.4  0.000000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  30.2 
 
 		 210 aa  82.4  0.000000000000005  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  30.29 
 
 		 222 aa  82.4  0.000000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  30.2 
 
 		 210 aa  82  0.000000000000008  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_006274  BCZK1321  response regulator  30.2 
 
 		 210 aa  81.6  0.000000000000009  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  30.51 
 
 		 212 aa  81.6  0.00000000000001  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  31.16 
 
 		 212 aa  79.3  0.00000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  30.8 
 
 		 209 aa  79.3  0.00000000000005  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  29.38 
 
 		 216 aa  79  0.00000000000006  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  31.71 
 
 		 221 aa  79  0.00000000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  28.36 
 
 		 216 aa  78.2  0.0000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  27.59 
 
 		 224 aa  78.2  0.0000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  33.17 
 
 		 238 aa  76.6  0.0000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  30.73 
 
 		 218 aa  76.6  0.0000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  24.2 
 
 		 221 aa  76.3  0.0000000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  34.33 
 
 		 227 aa  76.3  0.0000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  28.79 
 
 		 232 aa  75.9  0.0000000000005  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  28.86 
 
 		 213 aa  75.5  0.0000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  27.14 
 
 		 208 aa  75.9  0.0000000000006  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  30.05 
 
 		 210 aa  75.5  0.0000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  28.79 
 
 		 232 aa  75.1  0.0000000000009  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  31.19 
 
 		 226 aa  75.1  0.0000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  26.9 
 
 		 221 aa  75.1  0.0000000000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1240  two component LuxR family transcriptional regulator  32.04 
 
 		 207 aa  75.1  0.0000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  29.41 
 
 		 211 aa  74.7  0.000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  29.21 
 
 		 217 aa  74.7  0.000000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  33.33 
 
 		 208 aa  74.7  0.000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  31 
 
 		 213 aa  74.7  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  29.21 
 
 		 217 aa  74.7  0.000000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.08 
 
 		 222 aa  74.3  0.000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  28.28 
 
 		 232 aa  75.1  0.000000000001  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  29.35 
 
 		 224 aa  74.7  0.000000000001  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  27.18 
 
 		 218 aa  73.9  0.000000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  30.35 
 
 		 216 aa  73.9  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  27.67 
 
 		 225 aa  73.6  0.000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  30.59 
 
 		 224 aa  73.6  0.000000000002  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  30.1 
 
 		 234 aa  74.3  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  30 
 
 		 224 aa  73.2  0.000000000003  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  30 
 
 		 224 aa  73.2  0.000000000003  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  29.27 
 
 		 220 aa  73.6  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  28.16 
 
 		 234 aa  73.2  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  27.86 
 
 		 220 aa  73.2  0.000000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  30.04 
 
 		 211 aa  72.8  0.000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.43 
 
 		 226 aa  72.4  0.000000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  30.47 
 
 		 222 aa  72  0.000000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  28.96 
 
 		 214 aa  72  0.000000000007  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  27.86 
 
 		 212 aa  72  0.000000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  26.6 
 
 		 217 aa  72  0.000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  30.05 
 
 		 228 aa  72  0.000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_010001  Cphy_0080  two component LuxR family transcriptional regulator  27.69 
 
 		 212 aa  71.6  0.000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  29.15 
 
 		 209 aa  71.6  0.00000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  30.24 
 
 		 218 aa  71.2  0.00000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  29.85 
 
 		 216 aa  71.6  0.00000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  30.24 
 
 		 218 aa  71.2  0.00000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  28 
 
 		 209 aa  71.2  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  28.3 
 
 		 226 aa  71.2  0.00000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  30.1 
 
 		 201 aa  70.9  0.00000000002  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  30.69 
 
 		 218 aa  70.5  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  30.81 
 
 		 216 aa  70.5  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  30.24 
 
 		 218 aa  70.5  0.00000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_10690  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.56 
 
 		 215 aa  70.5  0.00000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  30.69 
 
 		 217 aa  70.5  0.00000000002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  29.52 
 
 		 229 aa  70.9  0.00000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2579  two component transcriptional regulator, LuxR family  28.08 
 
 		 352 aa  70.9  0.00000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.0445779 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  26.9 
 
 		 213 aa  70.5  0.00000000002  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  28.08 
 
 		 222 aa  70.5  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_010571  Oter_3357  two component LuxR family transcriptional regulator  30.65 
 
 		 238 aa  70.1  0.00000000003  Opitutus terrae PB90-1  Bacteria  normal  0.1255  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  27.23 
 
 		 207 aa  70.1  0.00000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31 
 
 		 213 aa  69.7  0.00000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  27.72 
 
 		 209 aa  70.1  0.00000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  29.65 
 
 		 209 aa  70.1  0.00000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  29.15 
 
 		 219 aa  70.1  0.00000000003  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  27.32 
 
 		 216 aa  70.5  0.00000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  29.85 
 
 		 210 aa  70.1  0.00000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010816  BLD_0642  putative response regulator  28.84 
 
 		 217 aa  70.1  0.00000000003  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  29.85 
 
 		 210 aa  70.1  0.00000000003  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.147525 
 
 
-
 
NC_007410  Ava_B0209  two component LuxR family transcriptional regulator  26.92 
 
 		 223 aa  69.7  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  26.87 
 
 		 219 aa  69.7  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  29.11 
 
 		 236 aa  69.7  0.00000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  28.84 
 
 		 217 aa  69.7  0.00000000004  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  30 
 
 		 208 aa  69.7  0.00000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  29 
 
 		 218 aa  69.7  0.00000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
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