More than 300 homologs were found in PanDaTox collection
for query gene Sare_0350 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_0350  LuxR family transcriptional regulator  100 
 
 
202 aa  391  1e-108  Salinispora arenicola CNS-205  Bacteria  normal  0.204823  normal  0.0810275 
 
 
-
 
NC_013093  Amir_3574  transcriptional regulator, LuxR family  58 
 
 
206 aa  165  5e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0940  response regulator receiver protein  44.71 
 
 
207 aa  142  4e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5376  transcriptional regulator, LuxR family  43.06 
 
 
213 aa  139  1.9999999999999998e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.416669  n/a   
 
 
-
 
NC_013235  Namu_1891  transcriptional regulator, LuxR family  41.83 
 
 
230 aa  122  5e-27  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00164243  normal  0.142555 
 
 
-
 
NC_014151  Cfla_2255  transcriptional regulator, LuxR family  43.27 
 
 
207 aa  121  9e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0543436  hitchhiker  0.000519578 
 
 
-
 
NC_009953  Sare_4852  LuxR family transcriptional regulator  37.68 
 
 
207 aa  109  2.0000000000000002e-23  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0262091 
 
 
-
 
NC_013093  Amir_2930  transcriptional regulator, LuxR family  41.26 
 
 
208 aa  108  4.0000000000000004e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_014151  Cfla_2886  transcriptional regulator, LuxR family  37.23 
 
 
252 aa  100  1e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.197544  normal  0.152863 
 
 
-
 
NC_009921  Franean1_3808  LuxR family transcriptional regulator  45.51 
 
 
268 aa  97.1  2e-19  Frankia sp. EAN1pec  Bacteria  normal  0.0706178  normal  0.229787 
 
 
-
 
NC_013093  Amir_2952  transcriptional regulator, LuxR family  37.98 
 
 
207 aa  91.3  9e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0281323  n/a   
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  32.85 
 
 
232 aa  90.1  2e-17  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4395  transcriptional regulator, LuxR family  34.25 
 
 
208 aa  88.2  7e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0351  LuxR family transcriptional regulator  32.37 
 
 
195 aa  78.6  0.00000000000006  Salinispora arenicola CNS-205  Bacteria  normal  0.147651  normal  0.0771656 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  33.33 
 
 
219 aa  76.6  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  33.79 
 
 
220 aa  76.3  0.0000000000003  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_008781  Pnap_3628  two component LuxR family transcriptional regulator  28.16 
 
 
292 aa  75.5  0.0000000000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.350857 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  33.49 
 
 
219 aa  73.9  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  27.23 
 
 
216 aa  73.6  0.000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  33.33 
 
 
219 aa  72.8  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  30 
 
 
227 aa  70.1  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  30.05 
 
 
235 aa  69.3  0.00000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  31.82 
 
 
219 aa  69.3  0.00000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013093  Amir_3573  transcriptional regulator, LuxR family  34.81 
 
 
189 aa  68.2  0.00000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  31.36 
 
 
226 aa  68.2  0.00000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  31.53 
 
 
224 aa  67.8  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  27.1 
 
 
217 aa  67  0.0000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  33.56 
 
 
218 aa  67  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  28.22 
 
 
262 aa  66.6  0.0000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  25.35 
 
 
231 aa  65.5  0.0000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  35.56 
 
 
218 aa  65.1  0.0000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  30.92 
 
 
210 aa  65.1  0.0000000006  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  31.82 
 
 
234 aa  65.1  0.0000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  30.92 
 
 
210 aa  65.1  0.0000000007  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  30.92 
 
 
210 aa  65.1  0.0000000007  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  30.92 
 
 
210 aa  65.1  0.0000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  30.92 
 
 
210 aa  65.1  0.0000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  30.92 
 
 
210 aa  65.1  0.0000000007  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  30.92 
 
 
210 aa  65.1  0.0000000007  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  29.94 
 
 
221 aa  64.7  0.0000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  30.32 
 
 
234 aa  64.7  0.0000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  29.8 
 
 
213 aa  64.3  0.000000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0268  two component LuxR family transcriptional regulator  30.92 
 
 
217 aa  64.3  0.000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.289536  normal 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  30.92 
 
 
210 aa  63.9  0.000000001  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  29.03 
 
 
303 aa  64.3  0.000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  31.16 
 
 
220 aa  63.9  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  30.92 
 
 
210 aa  64.3  0.000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  30.29 
 
 
210 aa  63.9  0.000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1772  two component transcriptional regulator, LuxR family  29.27 
 
 
262 aa  63.9  0.000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  30.1 
 
 
210 aa  63.9  0.000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007948  Bpro_2543  two component LuxR family transcriptional regulator  26.15 
 
 
230 aa  63.5  0.000000002  Polaromonas sp. JS666  Bacteria  normal  0.149636  normal  0.0443917 
 
 
-
 
NC_013093  Amir_6962  two component transcriptional regulator, LuxR family  33.66 
 
 
234 aa  63.2  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  37.31 
 
 
213 aa  63.2  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  32.65 
 
 
218 aa  63.2  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  32.56 
 
 
228 aa  63.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  21.66 
 
 
218 aa  63.2  0.000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  30.59 
 
 
226 aa  63.2  0.000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  30.05 
 
 
218 aa  62.4  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009380  Strop_2235  regulatory protein, LuxR  31.94 
 
 
231 aa  62  0.000000007  Salinispora tropica CNB-440  Bacteria  normal  0.422182  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  31.31 
 
 
220 aa  61.6  0.000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  30.82 
 
 
216 aa  61.2  0.00000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_4648  two component LuxR family transcriptional regulator  35.16 
 
 
219 aa  60.8  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  28.84 
 
 
215 aa  60.8  0.00000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  30.73 
 
 
211 aa  60.8  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  28.9 
 
 
221 aa  60.8  0.00000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  28.17 
 
 
215 aa  60.5  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  27.7 
 
 
214 aa  60.5  0.00000002  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  27.98 
 
 
237 aa  60.5  0.00000002  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  31.13 
 
 
214 aa  60.1  0.00000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  30.61 
 
 
220 aa  60.5  0.00000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  29.55 
 
 
225 aa  60.5  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  26.48 
 
 
234 aa  60.1  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  31.51 
 
 
228 aa  60.1  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  30.41 
 
 
222 aa  60.1  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  26.19 
 
 
209 aa  60.1  0.00000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_009523  RoseRS_4503  two component LuxR family transcriptional regulator  30.14 
 
 
221 aa  60.5  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.0169691 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  29.17 
 
 
215 aa  59.7  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  31.25 
 
 
213 aa  59.7  0.00000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  31.71 
 
 
216 aa  59.7  0.00000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0659  transcriptional regulator FimZ  23.96 
 
 
210 aa  59.7  0.00000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.611229  normal 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  31.29 
 
 
213 aa  59.3  0.00000003  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_011080  SNSL254_A0602  transcriptional regulator FimZ  23.96 
 
 
210 aa  59.7  0.00000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.379869  normal  0.0923244 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  28.91 
 
 
219 aa  59.7  0.00000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.19 
 
 
216 aa  59.7  0.00000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.657091 
 
 
-
 
NC_013235  Namu_0608  two component transcriptional regulator, LuxR family  33.54 
 
 
228 aa  59.7  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0594  transcriptional regulator FimZ  23.96 
 
 
210 aa  59.7  0.00000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.627077  hitchhiker  0.00790766 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  27.75 
 
 
253 aa  59.3  0.00000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0595  transcriptional regulator FimZ  23.81 
 
 
210 aa  59.3  0.00000004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.447967  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  27.09 
 
 
210 aa  59.3  0.00000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A0598  transcriptional regulator FimZ  23.81 
 
 
210 aa  59.3  0.00000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.110504 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  28.51 
 
 
234 aa  58.9  0.00000004  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  31.25 
 
 
225 aa  58.9  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  27.91 
 
 
221 aa  58.9  0.00000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  33.11 
 
 
217 aa  58.9  0.00000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  27.8 
 
 
230 aa  58.9  0.00000005  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  33.12 
 
 
238 aa  58.9  0.00000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_013757  Gobs_0223  two component transcriptional regulator, LuxR family  37.59 
 
 
237 aa  58.9  0.00000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  31.84 
 
 
220 aa  58.5  0.00000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  31.71 
 
 
216 aa  58.5  0.00000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  34.69 
 
 
216 aa  58.2  0.00000008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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