More than 300 homologs were found in PanDaTox collection
for query gene Rleg_5904 on replicon NC_012853
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012853  Rleg_5904  short-chain dehydrogenase/reductase SDR  100 
 
 
265 aa  541  1e-153  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.708406  normal 
 
 
-
 
NC_012853  Rleg_5590  short-chain dehydrogenase/reductase SDR  90.42 
 
 
266 aa  490  1e-137  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.263195  hitchhiker  0.00574732 
 
 
-
 
NC_007925  RPC_1224  short-chain dehydrogenase/reductase SDR  67.18 
 
 
261 aa  367  1e-100  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.000362575 
 
 
-
 
NC_008254  Meso_3682  short-chain dehydrogenase/reductase SDR  62.79 
 
 
261 aa  345  6e-94  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3574  short-chain dehydrogenase/reductase SDR  58.75 
 
 
267 aa  296  2e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  0.259441  normal  0.335877 
 
 
-
 
NC_009429  Rsph17025_3335  hypothetical protein  53.17 
 
 
249 aa  264  1e-69  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2531  normal  0.255614 
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  48.26 
 
 
267 aa  258  6e-68  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_013757  Gobs_3857  short-chain dehydrogenase/reductase SDR  48.26 
 
 
263 aa  239  2.9999999999999997e-62  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0746  short-chain dehydrogenase/reductase SDR  42.16 
 
 
268 aa  206  2e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.219555 
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  43.87 
 
 
271 aa  200  1.9999999999999998e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  43.87 
 
 
265 aa  199  5e-50  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_009077  Mjls_2901  short-chain dehydrogenase/reductase SDR  45.18 
 
 
231 aa  192  7e-48  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2871  short-chain dehydrogenase/reductase SDR  45.18 
 
 
231 aa  192  7e-48  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2915  short-chain dehydrogenase/reductase SDR  45.18 
 
 
231 aa  192  7e-48  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1227  short-chain dehydrogenase/reductase SDR  36.86 
 
 
261 aa  173  1.9999999999999998e-42  Methylobacterium populi BJ001  Bacteria  normal  0.198957  normal  0.373488 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  39.46 
 
 
344 aa  171  2e-41  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  37.45 
 
 
298 aa  167  1e-40  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  39.23 
 
 
289 aa  167  2e-40  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  37.14 
 
 
264 aa  161  1e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  35.32 
 
 
256 aa  155  5.0000000000000005e-37  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  36.95 
 
 
260 aa  151  1e-35  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.36 
 
 
263 aa  150  2e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  36 
 
 
259 aa  150  2e-35  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  36.33 
 
 
360 aa  149  5e-35  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  33.86 
 
 
266 aa  146  3e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_008255  CHU_2064  oxidoreductase ( short-chain dehydrogenase)  33.86 
 
 
264 aa  145  9e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.694867  normal  0.0846624 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  33.47 
 
 
266 aa  144  2e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  33.59 
 
 
257 aa  142  4e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  31.5 
 
 
262 aa  142  4e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  34.52 
 
 
263 aa  138  1e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  33.59 
 
 
267 aa  138  1e-31  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_008255  CHU_2063  short-chain dehydrogenase  35.62 
 
 
261 aa  135  6.0000000000000005e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0247773  normal  0.17766 
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  32.55 
 
 
257 aa  134  9.999999999999999e-31  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  34.92 
 
 
257 aa  134  1.9999999999999998e-30  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  37.44 
 
 
259 aa  133  3e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  35.15 
 
 
272 aa  133  3e-30  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  33.74 
 
 
258 aa  133  3e-30  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  35.19 
 
 
258 aa  132  7.999999999999999e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  34.35 
 
 
262 aa  130  3e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  34.76 
 
 
258 aa  129  4.0000000000000003e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  32.92 
 
 
263 aa  129  6e-29  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  33.46 
 
 
267 aa  128  1.0000000000000001e-28  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  33.09 
 
 
267 aa  128  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  32.92 
 
 
321 aa  127  1.0000000000000001e-28  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  33.09 
 
 
267 aa  128  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_013204  Elen_0666  short-chain dehydrogenase/reductase SDR  31.12 
 
 
343 aa  127  2.0000000000000002e-28  Eggerthella lenta DSM 2243  Bacteria  normal  0.019294  hitchhiker  0.000464867 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  32.66 
 
 
261 aa  126  3e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  32.02 
 
 
271 aa  127  3e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  33.99 
 
 
262 aa  126  4.0000000000000003e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  32.18 
 
 
291 aa  124  2e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  32.26 
 
 
261 aa  124  2e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  37.14 
 
 
262 aa  124  2e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  36.73 
 
 
262 aa  123  2e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  36.73 
 
 
262 aa  123  2e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  38.24 
 
 
255 aa  123  3e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  34.4 
 
 
257 aa  123  4e-27  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
BN001305  ANIA_08398  conserved hypothetical protein  30.65 
 
 
364 aa  122  7e-27  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009077  Mjls_0285  short-chain dehydrogenase/reductase SDR  35.52 
 
 
264 aa  121  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  34.58 
 
 
276 aa  121  9.999999999999999e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_008146  Mmcs_0294  short-chain dehydrogenase/reductase SDR  35.52 
 
 
264 aa  121  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0304  short-chain dehydrogenase/reductase SDR  35.52 
 
 
264 aa  121  9.999999999999999e-27  Mycobacterium sp. KMS  Bacteria  normal  normal  0.20364 
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  33.88 
 
 
258 aa  120  1.9999999999999998e-26  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  33.07 
 
 
273 aa  120  1.9999999999999998e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  36.04 
 
 
250 aa  120  1.9999999999999998e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  34.14 
 
 
253 aa  120  3e-26  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  31.95 
 
 
270 aa  119  4.9999999999999996e-26  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_009636  Smed_1269  short-chain dehydrogenase/reductase SDR  32.23 
 
 
294 aa  118  9e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.618635  normal  0.87927 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  39.58 
 
 
271 aa  118  9e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  35.11 
 
 
270 aa  118  9.999999999999999e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  32.16 
 
 
264 aa  117  1.9999999999999998e-25  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  33.07 
 
 
258 aa  117  3e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  33.47 
 
 
267 aa  116  3.9999999999999997e-25  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  30.61 
 
 
257 aa  116  3.9999999999999997e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  29.3 
 
 
259 aa  116  3.9999999999999997e-25  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  31.85 
 
 
256 aa  116  3.9999999999999997e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  34.03 
 
 
259 aa  115  5e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  30.71 
 
 
264 aa  115  5e-25  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  32.66 
 
 
262 aa  115  6e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  32.95 
 
 
266 aa  115  6.9999999999999995e-25  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  33.06 
 
 
261 aa  115  8.999999999999998e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3522  short-chain dehydrogenase/reductase SDR  30.17 
 
 
289 aa  114  1.0000000000000001e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  34.96 
 
 
268 aa  114  2.0000000000000002e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  34.26 
 
 
269 aa  114  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  31.62 
 
 
263 aa  113  3e-24  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_008530  LGAS_0875  Short-chain dehydrogenase of various substrate specificities  34.6 
 
 
264 aa  113  3e-24  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00123287 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  34.88 
 
 
259 aa  112  5e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  35.68 
 
 
276 aa  112  5e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  34.91 
 
 
256 aa  112  6e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  37.57 
 
 
266 aa  112  6e-24  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  31.98 
 
 
260 aa  112  6e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  33.74 
 
 
264 aa  112  7.000000000000001e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  35.86 
 
 
265 aa  112  8.000000000000001e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  31.89 
 
 
263 aa  112  8.000000000000001e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  30.62 
 
 
269 aa  111  1.0000000000000001e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  31.02 
 
 
259 aa  111  1.0000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  33.75 
 
 
263 aa  111  1.0000000000000001e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1378  hypothetical protein  28.91 
 
 
259 aa  111  2.0000000000000002e-23  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_1539  short-chain dehydrogenase/reductase SDR  29.07 
 
 
223 aa  110  3e-23  Acidiphilium cryptum JF-5  Bacteria  normal  0.382635  n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  32.5 
 
 
259 aa  110  3e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  32.27 
 
 
266 aa  110  3e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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