More than 300 homologs were found in PanDaTox collection
for query gene LGAS_0875 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008530  LGAS_0875  Short-chain dehydrogenase of various substrate specificities  100 
 
 
264 aa  541  1e-153  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00123287 
 
 
-
 
NC_009513  Lreu_0660  short-chain dehydrogenase/reductase SDR  43.97 
 
 
284 aa  233  2.0000000000000002e-60  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  42.42 
 
 
264 aa  229  2e-59  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  42.8 
 
 
264 aa  229  2e-59  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  42.42 
 
 
264 aa  229  2e-59  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  42.42 
 
 
264 aa  229  2e-59  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  42.05 
 
 
264 aa  228  8e-59  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  42.05 
 
 
264 aa  227  1e-58  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  42.42 
 
 
264 aa  227  1e-58  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  41.67 
 
 
264 aa  228  1e-58  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  41.67 
 
 
264 aa  226  2e-58  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  41.67 
 
 
264 aa  227  2e-58  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  41.29 
 
 
264 aa  222  4e-57  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  40.32 
 
 
262 aa  201  9.999999999999999e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  42.68 
 
 
262 aa  196  4.0000000000000005e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008532  STER_1192  oxidoreductase, short chain dehydrogenase/reductase family  39.2 
 
 
255 aa  191  1e-47  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1209  short chain dehydrogenase/reductase family oxidoreductase  36.9 
 
 
253 aa  177  1e-43  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  33.46 
 
 
258 aa  143  2e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  35.43 
 
 
262 aa  137  2e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  36.32 
 
 
264 aa  137  2e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  34.63 
 
 
238 aa  137  2e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  34.75 
 
 
266 aa  136  4e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_008527  LACR_0655  Short-chain dehydrogenase of various substrate specificities  35.83 
 
 
233 aa  134  9.999999999999999e-31  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  35.91 
 
 
262 aa  132  5e-30  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  36.32 
 
 
258 aa  132  6e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  35.11 
 
 
266 aa  132  6.999999999999999e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  33.62 
 
 
233 aa  131  1.0000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  38.1 
 
 
258 aa  131  1.0000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  32.93 
 
 
264 aa  129  4.0000000000000003e-29  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_006368  lpp0362  hypothetical protein  37.37 
 
 
257 aa  129  6e-29  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2457  short-chain dehydrogenase/reductase SDR  31.47 
 
 
291 aa  129  7.000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0300911  n/a   
 
 
-
 
NC_006369  lpl0338  hypothetical protein  37.37 
 
 
257 aa  128  9.000000000000001e-29  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  35.71 
 
 
321 aa  127  1.0000000000000001e-28  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35.35 
 
 
271 aa  128  1.0000000000000001e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  35.71 
 
 
263 aa  128  1.0000000000000001e-28  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  35.43 
 
 
258 aa  127  2.0000000000000002e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  35.23 
 
 
259 aa  127  2.0000000000000002e-28  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  32.28 
 
 
267 aa  126  3e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_011729  PCC7424_3439  short-chain dehydrogenase/reductase SDR  36.79 
 
 
270 aa  125  5e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.349709 
 
 
-
 
NC_013132  Cpin_0128  short-chain dehydrogenase/reductase SDR  35.78 
 
 
246 aa  125  6e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  29.41 
 
 
261 aa  125  6e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
CP001800  Ssol_2000  short-chain dehydrogenase/reductase SDR  31.45 
 
 
247 aa  125  8.000000000000001e-28  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
BN001308  ANIA_00618  conserved hypothetical protein  37.34 
 
 
268 aa  124  1e-27  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.767704 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  37.67 
 
 
260 aa  124  1e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_009524  PsycPRwf_0093  short-chain dehydrogenase/reductase SDR  36.27 
 
 
266 aa  124  1e-27  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  35.56 
 
 
266 aa  123  3e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  33.93 
 
 
260 aa  123  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  33.2 
 
 
273 aa  123  3e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0301  short-chain dehydrogenase/reductase SDR  34.69 
 
 
305 aa  123  4e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0783167 
 
 
-
 
BN001308  ANIA_00179  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G11240)  34.57 
 
 
313 aa  122  5e-27  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.983253  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  32.79 
 
 
259 aa  122  5e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3764  3-ketoacyl-(acyl-carrier-protein) reductase  36.45 
 
 
251 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000212417  normal  0.0482294 
 
 
-
 
NC_007413  Ava_4667  Short-chain dehydrogenase/reductase SDR  38.02 
 
 
234 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_2555  short-chain dehydrogenase/reductase SDR  33.78 
 
 
231 aa  122  6e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.459049  n/a   
 
 
-
 
NC_009487  SaurJH9_2505  short-chain dehydrogenase/reductase SDR  33.78 
 
 
231 aa  122  6e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_7087  short chain dehydrogenase  36.56 
 
 
284 aa  122  6e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  36.92 
 
 
261 aa  122  7e-27  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  37.44 
 
 
257 aa  121  9.999999999999999e-27  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_007413  Ava_2965  Short-chain dehydrogenase/reductase SDR  37.84 
 
 
293 aa  121  9.999999999999999e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  30.84 
 
 
238 aa  120  1.9999999999999998e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  31.13 
 
 
308 aa  120  1.9999999999999998e-26  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  31.65 
 
 
266 aa  119  3e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  35.9 
 
 
230 aa  119  3e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  36.98 
 
 
261 aa  120  3e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  34 
 
 
259 aa  120  3e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_011726  PCC8801_0911  short chain dehydrogenase  34.82 
 
 
242 aa  120  3e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  34.76 
 
 
249 aa  120  3e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_011370  Rleg2_6281  short-chain dehydrogenase/reductase SDR  33.18 
 
 
264 aa  120  3e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.616501 
 
 
-
 
NC_011080  SNSL254_A0559  short chain dehydrogenase  32.27 
 
 
256 aa  119  3.9999999999999996e-26  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009440  Msed_1778  short-chain dehydrogenase/reductase SDR  32.47 
 
 
243 aa  119  3.9999999999999996e-26  Metallosphaera sedula DSM 5348  Archaea  normal  0.809428  normal 
 
 
-
 
NC_008686  Pden_2157  short-chain dehydrogenase/reductase SDR  34.58 
 
 
243 aa  119  3.9999999999999996e-26  Paracoccus denitrificans PD1222  Bacteria  normal  0.300132  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  36.32 
 
 
264 aa  119  4.9999999999999996e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_008009  Acid345_2502  short-chain dehydrogenase/reductase SDR  30.92 
 
 
279 aa  119  4.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.729969 
 
 
-
 
NC_013161  Cyan8802_0938  short chain dehydrogenase  34.82 
 
 
242 aa  119  4.9999999999999996e-26  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2674  short chain dehydrogenase  34.36 
 
 
286 aa  119  6e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.570073  normal 
 
 
-
 
NC_011884  Cyan7425_1650  short-chain dehydrogenase/reductase SDR  34.75 
 
 
254 aa  119  7e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.206138  normal 
 
 
-
 
NC_011083  SeHA_C0613  short chain dehydrogenase  31.87 
 
 
256 aa  118  7.999999999999999e-26  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.473252  normal 
 
 
-
 
NC_014248  Aazo_4962  short-chain dehydrogenase/reductase SDR  35.68 
 
 
290 aa  118  7.999999999999999e-26  'Nostoc azollae' 0708  Bacteria  unclonable  0.00000187582  n/a   
 
 
-
 
NC_011149  SeAg_B0552  short chain dehydrogenase  31.87 
 
 
256 aa  118  7.999999999999999e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0554  short chain dehydrogenase  31.87 
 
 
256 aa  118  7.999999999999999e-26  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  30.23 
 
 
263 aa  118  7.999999999999999e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0569  short chain dehydrogenase  31.87 
 
 
256 aa  118  7.999999999999999e-26  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1655  hypothetical protein  31.78 
 
 
283 aa  118  9e-26  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  31.49 
 
 
269 aa  118  9e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  34 
 
 
544 aa  117  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_011884  Cyan7425_0401  short-chain dehydrogenase/reductase SDR  34.98 
 
 
240 aa  118  9.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.256418  normal  0.85584 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  33.33 
 
 
248 aa  118  9.999999999999999e-26  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  36.04 
 
 
260 aa  117  9.999999999999999e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009727  CBUD_0471  short chain dehydrogenase  33.85 
 
 
258 aa  117  1.9999999999999998e-25  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  34.03 
 
 
263 aa  117  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_006369  lpl1648  hypothetical protein  31.78 
 
 
283 aa  117  1.9999999999999998e-25  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  36.32 
 
 
263 aa  117  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  34.21 
 
 
238 aa  117  1.9999999999999998e-25  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  33.33 
 
 
256 aa  117  1.9999999999999998e-25  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  36.51 
 
 
264 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
CP001509  ECD_00444  short chain dehydrogenase  30.12 
 
 
269 aa  117  3e-25  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0131  3-oxoacyl-(acyl-carrier-protein) reductase  31.03 
 
 
245 aa  116  3e-25  Chlorobium luteolum DSM 273  Bacteria  normal  0.120855  normal 
 
 
-
 
NC_009801  EcE24377A_0532  short chain dehydrogenase  30.12 
 
 
269 aa  117  3e-25  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3307  short-chain dehydrogenase/reductase SDR  36.04 
 
 
275 aa  117  3e-25  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00449  hypothetical protein  30.12 
 
 
269 aa  117  3e-25  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
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