More than 300 homologs were found in PanDaTox collection
for query gene Msil_2100 on replicon NC_011666
Organism: Methylocella silvestris BL2



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_2100  HAD-superfamily hydrolase, subfamily IA, variant 1  100 
 
 		 215 aa  427  1e-119  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_1313  HAD family hydrolase  65.89 
 
 		 232 aa  291  6e-78  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.95229 
 
 
-
 
NC_010725  Mpop_0356  HAD-superfamily hydrolase, subfamily IA, variant 1  56.02 
 
 		 233 aa  239  2e-62  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_0280  HAD family hydrolase  55.56 
 
 		 233 aa  239  2e-62  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0323  HAD-superfamily hydrolase, subfamily IA, variant 1  55.09 
 
 		 233 aa  238  6.999999999999999e-62  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.0341719 
 
 
-
 
NC_011894  Mnod_7122  HAD-superfamily hydrolase, subfamily IA, variant 1  56.46 
 
 		 219 aa  221  8e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_6369  HAD family hydrolase  55.02 
 
 		 219 aa  213  1.9999999999999998e-54  Methylobacterium sp. 4-46  Bacteria  normal  0.23133  normal  0.167912 
 
 
-
 
NC_010505  Mrad2831_0854  HAD family hydrolase  51.23 
 
 		 221 aa  208  4e-53  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.249022  decreased coverage  0.000200034 
 
 
-
 
NC_009720  Xaut_4762  HAD family hydrolase  50.24 
 
 		 242 aa  192  4e-48  Xanthobacter autotrophicus Py2  Bacteria  normal  0.698376  hitchhiker  0.00269567 
 
 
-
 
NC_009952  Dshi_0316  phosphoglycolate phosphatase  49.3 
 
 		 226 aa  172  2.9999999999999996e-42  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.547041 
 
 
-
 
NC_007643  Rru_A2658  haloacid dehalogenase-like hydrolase  46.23 
 
 		 236 aa  171  6.999999999999999e-42  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0292  HAD family hydrolase  46.95 
 
 		 222 aa  171  1e-41  Ruegeria sp. TM1040  Bacteria  normal  0.402537  normal  0.982934 
 
 
-
 
NC_004310  BR1002  HAD superfamily hydrolase  42.18 
 
 		 221 aa  164  9e-40  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_0968  HAD superfamily hydrolase  42.18 
 
 		 221 aa  164  9e-40  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_2768  HAD family hydrolase  45.28 
 
 		 237 aa  162  3e-39  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.654297  normal  0.45248 
 
 
-
 
NC_008347  Mmar10_1760  HAD family hydrolase  44.81 
 
 		 260 aa  159  3e-38  Maricaulis maris MCS10  Bacteria  normal  0.960773  normal  0.487326 
 
 
-
 
NC_007794  Saro_2839  HAD family hydrolase  48.61 
 
 		 218 aa  158  7e-38  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0722376  n/a   
 
 
-
 
NC_011989  Avi_2262  hydrolase  38.99 
 
 		 223 aa  158  8e-38  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_2711  HAD family hydrolase  45.28 
 
 		 230 aa  157  9e-38  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_2085  HAD family hydrolase  41.71 
 
 		 223 aa  157  1e-37  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_0625  HAD family hydrolase  47.64 
 
 		 221 aa  157  1e-37  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009636  Smed_1018  HAD family hydrolase  40.98 
 
 		 221 aa  154  1e-36  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.76802 
 
 
-
 
NC_008686  Pden_0791  HAD family hydrolase  45.75 
 
 		 220 aa  148  6e-35  Paracoccus denitrificans PD1222  Bacteria  normal  0.226537  normal  1 
 
 
-
 
NC_007802  Jann_0734  HAD family hydrolase  38.6 
 
 		 241 aa  139  1.9999999999999998e-32  Jannaschia sp. CCS1  Bacteria  normal  0.879574  normal  1 
 
 
-
 
NC_011369  Rleg2_1883  HAD-superfamily hydrolase, subfamily IA, variant 1  40.09 
 
 		 217 aa  137  8.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00501827  normal  0.0218555 
 
 
-
 
NC_011138  MADE_02338  putative phosphoglycolate phosphatase, contains a phosphatase-like domain  40 
 
 		 234 aa  136  2e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0463297  n/a   
 
 
-
 
NC_012850  Rleg_2085  HAD-superfamily hydrolase, subfamily IA, variant 1  39.81 
 
 		 217 aa  136  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0330594  normal  0.304125 
 
 
-
 
NC_010506  Swoo_2034  HAD family hydrolase  36.28 
 
 		 216 aa  131  6.999999999999999e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  0.645104  normal  0.0672621 
 
 
-
 
NC_007947  Mfla_1323  HAD family hydrolase  39.68 
 
 		 218 aa  130  1.0000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00010916  normal  0.934661 
 
 
-
 
NC_009831  Ssed_2632  HAD family hydrolase  35.65 
 
 		 216 aa  128  6e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  0.861911  hitchhiker  0.000131082 
 
 
-
 
NC_003910  CPS_2291  HAD family hydrolase  35.65 
 
 		 218 aa  123  3e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.265516  n/a   
 
 
-
 
NC_007963  Csal_1594  HAD family hydrolase  40.57 
 
 		 234 aa  122  4e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.109016  n/a   
 
 
-
 
NC_008700  Sama_1987  HAD family hydrolase  35.48 
 
 		 215 aa  122  4e-27  Shewanella amazonensis SB2B  Bacteria  normal  0.0143235  normal  0.0109237 
 
 
-
 
NC_012560  Avin_14840  HAD-superfamily hydrolase  37.74 
 
 		 220 aa  122  6e-27  Azotobacter vinelandii DJ  Bacteria  normal  0.770171  n/a   
 
 
-
 
NC_008576  Mmc1_1778  HAD family hydrolase  38.03 
 
 		 222 aa  121  7e-27  Magnetococcus sp. MC-1  Bacteria  normal  0.0979226  decreased coverage  0.0000822361 
 
 
-
 
NC_009439  Pmen_1621  HAD family hydrolase  36.49 
 
 		 231 aa  120  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.0638141  normal  1 
 
 
-
 
NC_008463  PA14_25590  putative hydrolase  39.07 
 
 		 230 aa  121  9.999999999999999e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.080664  normal  1 
 
 
-
 
NC_009656  PSPA7_2187  putative hydrolase  38.39 
 
 		 230 aa  120  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0143931  n/a   
 
 
-
 
NC_007484  Noc_0178  HAD family hydrolase  37.13 
 
 		 230 aa  120  1.9999999999999998e-26  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000756614  n/a   
 
 
-
 
NC_008709  Ping_2206  HAD family hydrolase  35.51 
 
 		 227 aa  120  1.9999999999999998e-26  Psychromonas ingrahamii 37  Bacteria  normal  0.0834963  normal  0.088242 
 
 
-
 
NC_009092  Shew_1595  HAD family hydrolase  34.85 
 
 		 219 aa  118  7e-26  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00389314  normal  0.0112895 
 
 
-
 
NC_007404  Tbd_1562  putative hydrolase  36.67 
 
 		 218 aa  116  1.9999999999999998e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.320439  normal  0.240105 
 
 
-
 
NC_009654  Mmwyl1_2240  HAD family hydrolase  35 
 
 		 214 aa  116  3e-25  Marinomonas sp. MWYL1  Bacteria  normal  0.279618  normal  0.937061 
 
 
-
 
NC_010322  PputGB1_1483  HAD family hydrolase  36.28 
 
 		 224 aa  114  1.0000000000000001e-24  Pseudomonas putida GB-1  Bacteria  normal  0.0762089  normal  1 
 
 
-
 
NC_011901  Tgr7_1355  HAD-superfamily hydrolase, subfamily IA, variant 1  38.95 
 
 		 228 aa  113  2.0000000000000002e-24  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.873579  n/a   
 
 
-
 
NC_007954  Sden_2300  HAD family hydrolase  33.49 
 
 		 215 aa  113  2.0000000000000002e-24  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000000835779  n/a   
 
 
-
 
NC_002947  PP_1907  HAD superfamily hydrolase  34.58 
 
 		 224 aa  112  3e-24  Pseudomonas putida KT2440  Bacteria  normal  1  unclonable  0.00000027861 
 
 
-
 
NC_009512  Pput_3807  HAD family hydrolase  34.58 
 
 		 224 aa  113  3e-24  Pseudomonas putida F1  Bacteria  normal  0.118188  normal  1 
 
 
-
 
NC_010501  PputW619_1518  HAD family hydrolase  36.45 
 
 		 226 aa  112  5e-24  Pseudomonas putida W619  Bacteria  hitchhiker  0.0020263  normal  1 
 
 
-
 
NC_009665  Shew185_1709  HAD family hydrolase  32.34 
 
 		 238 aa  111  1.0000000000000001e-23  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000621435  n/a   
 
 
-
 
NC_009997  Sbal195_1752  HAD family hydrolase  32.34 
 
 		 238 aa  111  1.0000000000000001e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000718269  normal  0.2896 
 
 
-
 
NC_013889  TK90_1192  HAD-superfamily hydrolase, subfamily IA, variant 1  34.88 
 
 		 232 aa  110  1.0000000000000001e-23  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.998223  normal  0.137923 
 
 
-
 
NC_004578  PSPTO_3839  HAD-superfamily hydrolase  36.54 
 
 		 220 aa  110  2.0000000000000002e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0865807  n/a   
 
 
-
 
NC_009052  Sbal_1712  HAD family hydrolase  31.78 
 
 		 239 aa  108  4.0000000000000004e-23  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000000827821  n/a   
 
 
-
 
NC_007005  Psyr_1640  HAD family hydrolase  36.06 
 
 		 220 aa  108  5e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.284861 
 
 
-
 
NC_011663  Sbal223_2655  HAD-superfamily hydrolase, subfamily IA, variant 3  31.36 
 
 		 239 aa  108  5e-23  Shewanella baltica OS223  Bacteria  normal  0.019501  hitchhiker  0.000128755 
 
 
-
 
NC_008825  Mpe_A0658  haloacid dehalogenase-like hydrolase  35.05 
 
 		 222 aa  108  5e-23  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.40238 
 
 
-
 
NC_008740  Maqu_1874  HAD family hydrolase  35.02 
 
 		 216 aa  107  2e-22  Marinobacter aquaeolei VT8  Bacteria  normal  0.785736  n/a   
 
 
-
 
NC_011761  AFE_2218  HAD-superfamily hydrolase, subfamily IA  38.35 
 
 		 227 aa  106  3e-22  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1872  HAD-superfamily hydrolase, subfamily IA, variant 3  38.35 
 
 		 227 aa  106  3e-22  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.117122  normal  1 
 
 
-
 
NC_011992  Dtpsy_2641  HAD-superfamily hydrolase, subfamily IA, variant 1  33.96 
 
 		 222 aa  105  4e-22  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3288  HAD family hydrolase  34.62 
 
 		 222 aa  105  4e-22  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_1492  HAD family hydrolase  31.68 
 
 		 217 aa  104  8e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.210059  n/a   
 
 
-
 
NC_007912  Sde_1621  TatD-related deoxyribonuclease  32.08 
 
 		 214 aa  104  1e-21  Saccharophagus degradans 2-40  Bacteria  normal  0.0243824  normal  1 
 
 
-
 
NC_010622  Bphy_0820  HAD family hydrolase  34.63 
 
 		 219 aa  103  1e-21  Burkholderia phymatum STM815  Bacteria  normal  0.362734  normal  1 
 
 
-
 
NC_010002  Daci_5280  HAD family hydrolase  37.89 
 
 		 228 aa  103  2e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.94241  normal  1 
 
 
-
 
NC_013422  Hneap_1758  HAD-superfamily hydrolase, subfamily IA, variant 1  34.45 
 
 		 234 aa  103  2e-21  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0639278  n/a   
 
 
-
 
NC_008577  Shewana3_2565  HAD family hydrolase  30.21 
 
 		 244 aa  103  2e-21  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00000244874  normal  1 
 
 
-
 
NC_010524  Lcho_0590  HAD family hydrolase  33.18 
 
 		 219 aa  102  3e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0419315 
 
 
-
 
NC_007951  Bxe_A1064  putative haloacid dehalogenase-like hydrolase  34.18 
 
 		 219 aa  102  3e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.259823  normal  1 
 
 
-
 
NC_009901  Spea_2502  HAD family hydrolase  29.56 
 
 		 200 aa  101  7e-21  Shewanella pealeana ATCC 700345  Bacteria  normal  0.396303  n/a   
 
 
-
 
NC_010681  Bphyt_2920  HAD-superfamily hydrolase, subfamily IA, variant 1  33.81 
 
 		 219 aa  101  7e-21  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00300829  normal  1 
 
 
-
 
NC_008752  Aave_1175  HAD family hydrolase  34.6 
 
 		 222 aa  101  7e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  0.341694  normal  1 
 
 
-
 
NC_009438  Sputcn32_1575  HAD family hydrolase  29.79 
 
 		 238 aa  101  1e-20  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000310395  n/a   
 
 
-
 
NC_008786  Veis_4786  HAD family hydrolase  37.37 
 
 		 225 aa  99.4  4e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.480444 
 
 
-
 
NC_008321  Shewmr4_2403  HAD family hydrolase  29.36 
 
 		 248 aa  98.2  7e-20  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000854479  normal  1 
 
 
-
 
NC_011662  Tmz1t_2434  HAD-superfamily hydrolase, subfamily IA, variant 1  35.26 
 
 		 218 aa  98.2  9e-20  Thauera sp. MZ1T  Bacteria  normal  0.282448  n/a   
 
 
-
 
NC_008599  CFF8240_0391  phosphoglycolate phosphatase  34.55 
 
 		 216 aa  97.8  1e-19  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2152  HAD-superfamily hydrolase, subfamily IA, variant 1  34.3 
 
 		 225 aa  96.7  2e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0072  HAD-superfamily hydrolase, subfamily IA, variant 3  35.38 
 
 		 230 aa  96.7  2e-19  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_2060  HAD-superfamily hydrolase, subfamily IA, variant 3  34.3 
 
 		 225 aa  94.7  1e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.750609  n/a   
 
 
-
 
NC_011898  Ccel_2097  HAD-superfamily hydrolase, subfamily IA, variant 3  28.37 
 
 		 221 aa  94.7  1e-18  Clostridium cellulolyticum H10  Bacteria  normal  0.284323  n/a   
 
 
-
 
NC_009674  Bcer98_3704  pyrophosphatase PpaX  29.91 
 
 		 212 aa  94.4  1e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1780  HAD family hydrolase  34.3 
 
 		 225 aa  94.4  1e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.587654  n/a   
 
 
-
 
NC_008390  Bamb_0989  HAD family hydrolase  36.27 
 
 		 222 aa  94.4  1e-18  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_010551  BamMC406_0993  HAD family hydrolase  35.71 
 
 		 222 aa  94  2e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A2273  HAD family hydrolase  34.18 
 
 		 219 aa  94  2e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.768763  n/a   
 
 
-
 
NC_007973  Rmet_2438  HAD family hydrolase  34.74 
 
 		 219 aa  93.6  2e-18  Cupriavidus metallidurans CH34  Bacteria  normal  0.625372  normal  1 
 
 
-
 
NC_008322  Shewmr7_2473  HAD family hydrolase  29.28 
 
 		 248 aa  94  2e-18  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000591891  hitchhiker  0.00615598 
 
 
-
 
NC_011059  Paes_0868  HAD-superfamily hydrolase, subfamily IA, variant 1  29.25 
 
 		 227 aa  92  5e-18  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00000353752  normal  0.072442 
 
 
-
 
NC_009074  BURPS668_2800  HAD superfamily hydrolase  35.89 
 
 		 219 aa  92.4  5e-18  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00584417  n/a   
 
 
-
 
NC_007434  BURPS1710b_2916  haloacid dehalogenase-like hydrolase  35.89 
 
 		 237 aa  92.4  5e-18  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0271792  n/a   
 
 
-
 
NC_009076  BURPS1106A_2861  HAD superfamily hydrolase  35.89 
 
 		 219 aa  92.4  5e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0565933  n/a   
 
 
-
 
NC_007492  Pfl01_4164  HAD family hydrolase  33.91 
 
 		 193 aa  92  6e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0540485  normal  0.889807 
 
 
-
 
NC_010184  BcerKBAB4_4954  pyrophosphatase PpaX  30.29 
 
 		 215 aa  92  6e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5246  pyrophosphatase PpaX  29.86 
 
 		 216 aa  91.7  7e-18  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_009921  Franean1_1661  AHBA synthesis associated protein  33.95 
 
 		 214 aa  91.3  9e-18  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.49792 
 
 
-
 
NC_007651  BTH_I1709  haloacid dehalogenase-like hydrolase  35.89 
 
 		 222 aa  90.9  1e-17  Burkholderia thailandensis E264  Bacteria  normal  0.0748768  n/a   
 
 
-
 
NC_007948  Bpro_3658  HAD family hydrolase  33.02 
 
 		 219 aa  90.5  2e-17  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010531  Pnec_0398  HAD-superfamily hydrolase, subfamily IA, variant 1  30.37 
 
 		 226 aa  90.1  2e-17  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>