| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2152 |
|---|
| Symbol | |
|---|
| ID | 7297161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 2391999 |
|---|
| End bp | 2392676 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643594949 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
|---|
| Protein accession | YP_002492558 |
|---|
| Protein GI | 220917254 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGG ACGTGCCAGA ACACCGCCGG ATGGCGATCC TGTTCGATCT GGACGGGACG
CTCGTCGACA CCGTTCCGTT CATCCTCGCC TCCGTGCGCC ACGCCTTCGA CGGGTACGGG
AGCTGCCCGA CCGACGCCGA GTGGATCGCC GGGATCGGGA CGCCGCTCCG CACCCAGCTC
GCCTCGTTCG CCCGCTGCGC CGAGGACGTC GAGCCCTTGC TCGCGCGCTA CCGCTCCTTC
TGGATCGCGG AGCACGATCG CTGGACGCGC TGCTTCCCCT CGGCGCGCGA GACGGTGCTG
ACGCTCGCGG GCCGGGGCCA TCCCCTCGGC GTGGTGACGG CGAAGACCGA GGAGGGCGCC
TACCGCACGC TCCGCCACGT GGGGCTGCTC GAGCGGATGG GGGCCGTGAT CGGGGCGGAC
AGCTGCGCCC GCTCGAAGCC CGACCCCGAG CCGGTGCGGC TCGCGCTGGC GCGGCTGGGC
GTCGGCGCGG ACGAGGCGGT GATGGTGGGC GACTCGCCGC ACGACCTGGC GGCCGGCCGG
GCGGCGGGCG TGCGGACGGT GGCCGCGCTG TGGGGCGCCT GCACGCCCTC GGTGCTCCGC
GCCGCCTCCC CCGACCACCT CCTCGAGGAC ATCGCGGCCC TGCCGGCGCT GCTCGAGGCC
ATCACCCAGG GTGCATGA
|
|---|
| Protein sequence | MMADVPEHRR MAILFDLDGT LVDTVPFILA SVRHAFDGYG SCPTDAEWIA GIGTPLRTQL
ASFARCAEDV EPLLARYRSF WIAEHDRWTR CFPSARETVL TLAGRGHPLG VVTAKTEEGA
YRTLRHVGLL ERMGAVIGAD SCARSKPDPE PVRLALARLG VGADEAVMVG DSPHDLAAGR
AAGVRTVAAL WGACTPSVLR AASPDHLLED IAALPALLEA ITQGA
|
|---|
| |