More than 300 homologs were found in PanDaTox collection
for query gene Mext_1977 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_1977  regulatory protein LuxR  100 
 
 		 235 aa  458  9.999999999999999e-129  Methylobacterium extorquens PA1  Bacteria  normal  0.215897  normal  1 
 
 
-
 
NC_011757  Mchl_2254  transcriptional regulator, LuxR family  94.67 
 
 		 235 aa  384  1e-106  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_1932  transcriptional regulator, LuxR family  77.59 
 
 		 241 aa  342  2e-93  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0592371 
 
 
-
 
NC_010505  Mrad2831_0756  LuxR family transcriptional regulator  56.52 
 
 		 228 aa  191  9e-48  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.826443 
 
 
-
 
NC_010511  M446_5044  LuxR family transcriptional regulator  54.93 
 
 		 230 aa  187  1e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.263575  hitchhiker  0.00837426 
 
 
-
 
NC_011894  Mnod_5351  transcriptional regulator, LuxR family  57.08 
 
 		 229 aa  184  1.0000000000000001e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.649636  n/a   
 
 
-
 
NC_010505  Mrad2831_1294  LuxR family transcriptional regulator  51.5 
 
 		 252 aa  170  2e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  33.33 
 
 		 228 aa  90.9  2e-17  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  31.75 
 
 		 213 aa  87.4  2e-16  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  35.53 
 
 		 231 aa  85.5  7e-16  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  32.54 
 
 		 215 aa  84.7  0.000000000000001  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  33.33 
 
 		 214 aa  82.4  0.000000000000006  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  32.06 
 
 		 215 aa  82  0.000000000000008  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  32.06 
 
 		 215 aa  82  0.000000000000008  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  32.85 
 
 		 214 aa  81.6  0.000000000000008  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  32.06 
 
 		 215 aa  82  0.000000000000008  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  32.06 
 
 		 215 aa  82  0.000000000000008  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  32.06 
 
 		 215 aa  82  0.000000000000008  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  32.06 
 
 		 215 aa  82  0.000000000000008  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  32.67 
 
 		 215 aa  81.6  0.000000000000009  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  31.82 
 
 		 215 aa  79.7  0.00000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  35.06 
 
 		 218 aa  78.6  0.00000000000007  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  37.04 
 
 		 213 aa  77.8  0.0000000000001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  32.54 
 
 		 214 aa  76.6  0.0000000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  29.8 
 
 		 214 aa  76.3  0.0000000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  32.86 
 
 		 224 aa  75.9  0.0000000000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  33.77 
 
 		 214 aa  75.1  0.0000000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  38.35 
 
 		 222 aa  75.1  0.0000000000009  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  30.5 
 
 		 213 aa  74.7  0.000000000001  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  31.13 
 
 		 215 aa  74.7  0.000000000001  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_009997  Sbal195_2246  two component LuxR family transcriptional regulator  25.7 
 
 		 214 aa  73.9  0.000000000002  Shewanella baltica OS195  Bacteria  normal  0.0703025  hitchhiker  0.00413313 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  33.12 
 
 		 214 aa  73.6  0.000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  33.12 
 
 		 214 aa  73.6  0.000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  33.12 
 
 		 214 aa  73.6  0.000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  35.81 
 
 		 213 aa  73.2  0.000000000003  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  33.12 
 
 		 214 aa  73.6  0.000000000003  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  33.12 
 
 		 214 aa  73.6  0.000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  33.17 
 
 		 210 aa  72.8  0.000000000004  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_1286  two component LuxR family transcriptional regulator  31.82 
 
 		 213 aa  72.4  0.000000000006  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.172682 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  32.02 
 
 		 217 aa  72  0.000000000008  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  32.38 
 
 		 217 aa  71.6  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  36.13 
 
 		 220 aa  71.2  0.00000000001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  34.92 
 
 		 215 aa  70.1  0.00000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  29.45 
 
 		 214 aa  70.1  0.00000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  34.01 
 
 		 228 aa  70.1  0.00000000003  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  33.33 
 
 		 233 aa  68.6  0.00000000008  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  31.06 
 
 		 224 aa  68.6  0.00000000009  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  37.39 
 
 		 220 aa  67.8  0.0000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  27.36 
 
 		 219 aa  67.8  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  25.58 
 
 		 215 aa  68.2  0.0000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  30.84 
 
 		 228 aa  67.8  0.0000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_1943  two component LuxR family transcriptional regulator  25.84 
 
 		 214 aa  68.2  0.0000000001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  31.4 
 
 		 217 aa  67  0.0000000002  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  37.9 
 
 		 212 aa  66.6  0.0000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  32.84 
 
 		 218 aa  66.2  0.0000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  29.81 
 
 		 212 aa  66.2  0.0000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  31.51 
 
 		 212 aa  66.2  0.0000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  35.61 
 
 		 222 aa  66.2  0.0000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  32 
 
 		 218 aa  65.9  0.0000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010498  EcSMS35_0580  transcriptional regulator FimZ  27.27 
 
 		 210 aa  65.9  0.0000000005  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
CP001637  EcDH1_3078  two component transcriptional regulator, LuxR family  27.27 
 
 		 210 aa  65.9  0.0000000006  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_0636  transcriptional regulator FimZ  27.27 
 
 		 210 aa  65.9  0.0000000006  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.931873  normal  0.250092 
 
 
-
 
NC_009801  EcE24377A_0577  transcriptional regulator FimZ  27.27 
 
 		 210 aa  65.9  0.0000000006  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  28.14 
 
 		 222 aa  65.5  0.0000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_4040  two component LuxR family transcriptional regulator  32.82 
 
 		 216 aa  65.5  0.0000000007  Pseudomonas mendocina ymp  Bacteria  normal  0.56786  normal  1 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  27.23 
 
 		 210 aa  65.5  0.0000000007  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
CP001509  ECD_00485  predicted DNA-binding transcriptional regulator  26.67 
 
 		 210 aa  65.1  0.0000000008  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3087  transcriptional regulator FimZ  26.67 
 
 		 210 aa  65.1  0.0000000008  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_5727  two component transcriptional regulator, LuxR family  29.01 
 
 		 212 aa  65.1  0.0000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.412106 
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.93 
 
 		 213 aa  65.5  0.0000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  32.34 
 
 		 224 aa  65.5  0.0000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_00490  hypothetical protein  26.67 
 
 		 210 aa  65.1  0.0000000008  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0370  two component LuxR family transcriptional regulator  36.44 
 
 		 214 aa  65.5  0.0000000008  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.273913 
 
 
-
 
NC_009800  EcHS_A0610  transcriptional regulator FimZ  26.67 
 
 		 210 aa  65.1  0.0000000008  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E0462  transcriptional regulator FimZ  28.48 
 
 		 199 aa  64.3  0.000000001  Shigella boydii CDC 3083-94  Bacteria  normal  0.739138  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  30.26 
 
 		 213 aa  64.7  0.000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  26.76 
 
 		 210 aa  64.7  0.000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_2781  two component LuxR family transcriptional regulator  30 
 
 		 204 aa  64.3  0.000000001  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  36.3 
 
 		 228 aa  64.7  0.000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  26.76 
 
 		 210 aa  64.7  0.000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  31.06 
 
 		 206 aa  64.7  0.000000001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_008687  Pden_4349  two component LuxR family transcriptional regulator  32.17 
 
 		 206 aa  64.3  0.000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.20794  normal  0.534464 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  32.21 
 
 		 216 aa  64.7  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  27.69 
 
 		 215 aa  64.3  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.01 
 
 		 229 aa  63.9  0.000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  30.63 
 
 		 210 aa  63.5  0.000000002  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  31.45 
 
 		 213 aa  63.9  0.000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  30.65 
 
 		 213 aa  63.5  0.000000003  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  35.11 
 
 		 215 aa  63.2  0.000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal  1 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  25.82 
 
 		 218 aa  63.2  0.000000003  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  30.65 
 
 		 213 aa  63.5  0.000000003  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  32.68 
 
 		 219 aa  63.2  0.000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  38.26 
 
 		 221 aa  63.5  0.000000003  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  28.79 
 
 		 212 aa  63.2  0.000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  34.51 
 
 		 224 aa  62.8  0.000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_0211  two component LuxR family transcriptional regulator  46.67 
 
 		 228 aa  63.2  0.000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.664514  normal  1 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  28.02 
 
 		 218 aa  62.8  0.000000005  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  30.63 
 
 		 206 aa  62.4  0.000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_010571  Oter_3357  two component LuxR family transcriptional regulator  34.85 
 
 		 238 aa  62.4  0.000000005  Opitutus terrae PB90-1  Bacteria  normal  0.1255  normal  1 
 
 
-
 
NC_013132  Cpin_1062  transcriptional regulator, LuxR family  37.23 
 
 		 234 aa  62.4  0.000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
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