Gene SbBS512_E0462 details

Gene Information

• Locus tag: SbBS512_E0462
• Symbol: fimZ
• ID: 6272959
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 447454
• End bp: 448053
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641724683
• Product: transcriptional regulator FimZ
• Protein accession: YP_001879231
• Protein GI: 187732058
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 0.739138
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCAA CGTCGGTGAT CATTATGGAT ACTCATCCTA TCATCAGAAT GTCTATTGAA 
GTTCTGTTGC AAAAAAACAG TGAATTGCAG ATTGTCCTGA AAACGGATGA TTACCGCATA 
ACCATCGATT ATCTCCGAAC CCGTCCTGTT GATTTAATCA TTATGGATAT AGACTTGCCC 
GGAACAGACG GTTTTACCTT CCTGAAAAGG ATCAAACAAA TCCAGAGCAC AGTGAAAGTG 
TTATTTTTAT CATCGAAATC AGAATGCTTT TATGCTGGCA GAGCGATACA AGCTGGTGCT 
AACGGTTTTG TCAGTAAATG CAATGATCAG AATGATATTT TTCATGCCGT TCAGATGATC 
CTCTCCGGAT ACACGTTTTT TCCCAGCGAA ACGCTTAACT ATATAAAAAG CAATAAATGT 
AGTACGAATA GTTCAACGGT CACTGTGCTA TCTAATCGTG AAGTGACCAT ATTACGTTAT 
CTGGTTAGCG GATTATCTAA TAAAGAAATT GCCGATAAGT TATTGCTTAG CAATAAAACA 
GTTAGTGCGC ATAAATCTAA TATTTATGGC AAGGGTAATG CTGCCAACTT ACTGATTTAG 

 

Protein sequence

MKPTSVIIMD THPIIRMSIE VLLQKNSELQ IVLKTDDYRI TIDYLRTRPV DLIIMDIDLP 
GTDGFTFLKR IKQIQSTVKV LFLSSKSECF YAGRAIQAGA NGFVSKCNDQ NDIFHAVQMI 
LSGYTFFPSE TLNYIKSNKC STNSSTVTVL SNREVTILRY LVSGLSNKEI ADKLLLSNKT 
VSAHKSNIYG KGNAANLLI