| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00485 |
|---|
| Symbol | fimZ |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 532941 |
|---|
| End bp | 533573 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | predicted DNA-binding transcriptional regulator |
|---|
| Protein accession | ACT42384 |
|---|
| Protein GI | 253976714 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAA CGTCGGTGAT CATTATGGAT ACTCATCCTA TCATCAGAAT GTCTATTGAA
GTTCTGTTGC AAAAAAACAG TGAATTGCAG ATTGTCCTGA AAACGGATGA TTACCGCATA
ACCATCGATT ATCTCCGAAC CCGTCCTGTT GATTTAATCA TTATGGATAT AGACTTGCCC
GGAACAGACG GTTTTACCTT CCTGAAAAGG ATCAAACAAA TCCAGAGCAC AGTGAAAGTG
TTATTTTTAT CATCGAAATC AGAATGCTTT TATGCTGGCA GAGCGATACA AGCTGGTGCT
AACGGTTTTG TCAGTAAATG CAATGATCAG AATGATATTT TTCATGCCGT TCAGATGATC
CTCTCCGGAT ACACGTTTTT TCCTAGCGAA ACGCTTAACT ATATAAAAAG CAATAAATGT
AGTACGAATA GTTCAACGAT CACTGTGCTA TCTAATCGTG AAGTGACCAT ATTACGTTAT
CTGGTTAGCG GATTATCTAA TAAAGAAATT GCCGATAAGT TATTACTTAG CAATAAAACA
GTTAGTGCGC ATAAATCTAA TATTTATGGC AAGCTAGGTT TGCATTCAAT TGTAGAGCTT
ATCGACTACG CCAAATTATA TGAATTAATA TAA
|
|---|
| Protein sequence | MKPTSVIIMD THPIIRMSIE VLLQKNSELQ IVLKTDDYRI TIDYLRTRPV DLIIMDIDLP
GTDGFTFLKR IKQIQSTVKV LFLSSKSECF YAGRAIQAGA NGFVSKCNDQ NDIFHAVQMI
LSGYTFFPSE TLNYIKSNKC STNSSTITVL SNREVTILRY LVSGLSNKEI ADKLLLSNKT
VSAHKSNIYG KLGLHSIVEL IDYAKLYELI
|
|---|
| |