More than 300 homologs were found in PanDaTox collection
for query gene Krad_0333 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_0333  response regulator receiver protein  100 
 
 
126 aa  245  2e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.139071  normal 
 
 
-
 
NC_013757  Gobs_1519  response regulator receiver protein  60.98 
 
 
125 aa  133  8e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.043846  n/a   
 
 
-
 
NC_011831  Cagg_0840  response regulator receiver protein  50.85 
 
 
132 aa  122  2e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3504  response regulator receiver protein  49.6 
 
 
127 aa  122  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0213  response regulator receiver domain-containing protein  48.78 
 
 
128 aa  117  7e-26  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4105  response regulator receiver domain-containing protein  50.43 
 
 
229 aa  111  3e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0374743 
 
 
-
 
NC_009439  Pmen_4314  response regulator receiver protein  48.7 
 
 
128 aa  108  3e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.7882  normal  0.646224 
 
 
-
 
NC_011884  Cyan7425_2946  response regulator receiver protein  42.74 
 
 
124 aa  107  5e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0239  response regulator receiver domain-containing protein  39.2 
 
 
132 aa  104  4e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0856  response regulator receiver protein  50 
 
 
126 aa  103  9e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0534273 
 
 
-
 
NC_007413  Ava_1627  response regulator receiver domain-containing protein  36.59 
 
 
125 aa  97.8  4e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.113437 
 
 
-
 
NC_011729  PCC7424_3993  response regulator receiver protein  37.19 
 
 
124 aa  97.4  5e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0199898 
 
 
-
 
NC_007413  Ava_2419  response regulator receiver domain-containing protein  39.67 
 
 
124 aa  97.1  7e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.730066  hitchhiker  0.0000120546 
 
 
-
 
NC_014248  Aazo_4227  response regulator receiver protein  36.59 
 
 
130 aa  93.2  1e-18  'Nostoc azollae' 0708  Bacteria  normal  0.482069  n/a   
 
 
-
 
NC_008347  Mmar10_2120  response regulator receiver protein  38.53 
 
 
131 aa  87.8  5e-17  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3719  response regulator receiver protein  36.44 
 
 
123 aa  87.4  6e-17  Cyanothece sp. PCC 8802  Bacteria  normal  0.173125  normal  0.315103 
 
 
-
 
NC_011726  PCC8801_3665  response regulator receiver protein  36.44 
 
 
123 aa  87.4  6e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_3942  response regulator receiver protein  41.53 
 
 
163 aa  86.7  1e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4550  response regulator receiver protein  37.7 
 
 
127 aa  85.9  2e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_1722  response regulator receiver protein  32.52 
 
 
123 aa  84  6e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00000000000000956357 
 
 
-
 
NC_007298  Daro_1632  response regulator receiver  42.4 
 
 
123 aa  82.4  0.000000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2955  two component transcriptional regulator, LuxR family  42.5 
 
 
231 aa  82  0.000000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.800941 
 
 
-
 
NC_008740  Maqu_3596  two component transcriptional regulator  40.68 
 
 
230 aa  81.6  0.000000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1838  two component transcriptional regulator, LuxR family  41.38 
 
 
231 aa  81.6  0.000000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  42.5 
 
 
236 aa  81.6  0.000000000000003  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_011726  PCC8801_1812  two component transcriptional regulator, LuxR family  41.38 
 
 
231 aa  81.6  0.000000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009511  Swit_1161  response regulator receiver protein  40.68 
 
 
126 aa  81.6  0.000000000000004  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.606485 
 
 
-
 
NC_007912  Sde_3838  response regulator receiver domain-containing protein  37.5 
 
 
234 aa  81.3  0.000000000000004  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.0000539223  normal 
 
 
-
 
NC_014165  Tbis_0845  response regulator receiver protein  40.5 
 
 
125 aa  81.3  0.000000000000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.455865  normal  0.167506 
 
 
-
 
NC_008312  Tery_4491  two component LuxR family transcriptional regulator  45.38 
 
 
233 aa  80.1  0.000000000000009  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.697305 
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  42.15 
 
 
229 aa  79.7  0.00000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_009654  Mmwyl1_4400  two component transcriptional regulator  36.44 
 
 
236 aa  79  0.00000000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.998417  normal 
 
 
-
 
NC_007777  Francci3_3728  response regulator receiver protein  42.37 
 
 
128 aa  79  0.00000000000002  Frankia sp. CcI3  Bacteria  normal  normal  0.445342 
 
 
-
 
NC_007413  Ava_0301  two component LuxR family transcriptional regulator  43.09 
 
 
231 aa  78.6  0.00000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.54347  normal 
 
 
-
 
NC_007413  Ava_1626  response regulator receiver domain-containing protein  35.54 
 
 
134 aa  78.2  0.00000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.184763 
 
 
-
 
NC_013501  Rmar_2360  response regulator receiver protein  40.16 
 
 
523 aa  78.6  0.00000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  37.39 
 
 
354 aa  78.2  0.00000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_011884  Cyan7425_4410  response regulator receiver protein  42.37 
 
 
131 aa  78.2  0.00000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.686937 
 
 
-
 
NC_009921  Franean1_1003  response regulator receiver protein  42.37 
 
 
128 aa  78.2  0.00000000000004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6138  two-component response regulator PhoB  34.88 
 
 
229 aa  77.8  0.00000000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  43.48 
 
 
239 aa  77.8  0.00000000000005  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_70750  two-component response regulator PhoB  34.88 
 
 
229 aa  77.8  0.00000000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1789  alkaline phosphatase synthesis response regulator  38.33 
 
 
229 aa  77.4  0.00000000000006  Bacillus cereus E33L  Bacteria  normal  0.11323  n/a   
 
 
-
 
NC_007298  Daro_3567  phosphate regulon transcriptional regulatory protein phoB  40.52 
 
 
228 aa  77.4  0.00000000000006  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1518  response regulator receiver modulated diguanylate cyclase  44.54 
 
 
767 aa  77.4  0.00000000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0706082  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  41.03 
 
 
352 aa  77.4  0.00000000000006  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_009512  Pput_5228  two component transcriptional regulator  34.88 
 
 
229 aa  77.4  0.00000000000007  Pseudomonas putida F1  Bacteria  normal  0.661336  normal  0.450139 
 
 
-
 
NC_010322  PputGB1_5367  two component transcriptional regulator  34.88 
 
 
229 aa  77.4  0.00000000000007  Pseudomonas putida GB-1  Bacteria  normal  normal  0.400776 
 
 
-
 
NC_011071  Smal_0824  two component transcriptional regulator, winged helix family  38.66 
 
 
229 aa  77  0.00000000000007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5320  winged helix family two component transcriptional regulator  34.88 
 
 
242 aa  77  0.00000000000008  Pseudomonas putida KT2440  Bacteria  normal  normal  0.023746 
 
 
-
 
NC_009664  Krad_0332  response regulator receiver protein  43.7 
 
 
806 aa  77  0.00000000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.112355  normal  0.937153 
 
 
-
 
NC_009428  Rsph17025_1787  response regulator receiver protein  36.59 
 
 
122 aa  77  0.00000000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2343  two component transcriptional regulator  41.46 
 
 
243 aa  76.6  0.00000000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00929975  n/a   
 
 
-
 
NC_010501  PputW619_0154  two component transcriptional regulator  34.88 
 
 
229 aa  77  0.00000000000009  Pseudomonas putida W619  Bacteria  normal  normal  0.596099 
 
 
-
 
NC_009976  P9211_01871  two-component response regulator  42.86 
 
 
242 aa  77  0.00000000000009  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3302  two component transcriptional regulator  38.66 
 
 
230 aa  76.6  0.00000000000009  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.288231  normal  0.346827 
 
 
-
 
NC_004578  PSPTO_5477  phosphate regulon transcriptional regulatory protein PhoB  34.65 
 
 
229 aa  76.3  0.0000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1832  DNA-binding response regulator  38.33 
 
 
229 aa  76.6  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.372268  n/a   
 
 
-
 
NC_005957  BT9727_1806  alkaline phosphatase synthesis response regulator  38.33 
 
 
229 aa  76.6  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000153503  n/a   
 
 
-
 
NC_007005  Psyr_1098  PAS:GGDEF  38.84 
 
 
705 aa  76.3  0.0000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5032  response regulator receiver:transcriptional regulatory protein, C-terminal  34.65 
 
 
229 aa  76.3  0.0000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.330128 
 
 
-
 
NC_011773  BCAH820_2010  DNA-binding response regulator  38.33 
 
 
229 aa  76.6  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.93984e-43 
 
 
-
 
NC_007492  Pfl01_5606  two component transcriptional regulator  34.88 
 
 
229 aa  76.6  0.0000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1396  response regulator receiver domain-containing protein  33.05 
 
 
125 aa  76.6  0.0000000000001  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.777573 
 
 
-
 
NC_013595  Sros_1560  response regulator receiver protein  41.03 
 
 
129 aa  76.6  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_1975  DNA-binding response regulator  38.33 
 
 
229 aa  76.6  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0483655  n/a   
 
 
-
 
NC_010717  PXO_02492  phosphate regulon transcriptional regulatory protein PhoB  37.82 
 
 
229 aa  76.3  0.0000000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.506678  n/a   
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40.87 
 
 
239 aa  76.6  0.0000000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3140  response regulator receiver protein  38.84 
 
 
128 aa  76.3  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.797309 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  40.5 
 
 
229 aa  76.3  0.0000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_009972  Haur_1220  response regulator receiver protein  39.47 
 
 
130 aa  76.3  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4408  two component transcriptional regulator  34.11 
 
 
229 aa  76.3  0.0000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0897949 
 
 
-
 
NC_003909  BCE_2059  DNA-binding response regulator  38.33 
 
 
229 aa  75.9  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000985599  n/a   
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  35.83 
 
 
231 aa  75.5  0.0000000000002  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_013411  GYMC61_0274  two component transcriptional regulator, winged helix family  42.37 
 
 
224 aa  75.5  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0840  two component transcriptional regulator, winged helix family  45.69 
 
 
241 aa  75.9  0.0000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.214337  normal  0.533835 
 
 
-
 
NC_005957  BT9727_1790  response regulator  37.61 
 
 
254 aa  75.9  0.0000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0306127  n/a   
 
 
-
 
NC_010581  Bind_3546  two component transcriptional regulator  41.67 
 
 
273 aa  75.9  0.0000000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.376665  normal  0.686762 
 
 
-
 
NC_007493  RSP_2443  putative chemotaxis response regulator, CheY5  36.59 
 
 
122 aa  76.3  0.0000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.451762  n/a   
 
 
-
 
NC_009049  Rsph17029_1107  response regulator receiver protein  36.59 
 
 
122 aa  76.3  0.0000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.91502 
 
 
-
 
NC_014248  Aazo_2987  LuxR family two component transcriptional regulator  43.31 
 
 
231 aa  75.5  0.0000000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_1712  two component transcriptional regulator  38.4 
 
 
248 aa  75.9  0.0000000000002  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1860  two component LuxR family transcriptional regulator  42.86 
 
 
235 aa  75.9  0.0000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  44.83 
 
 
240 aa  75.9  0.0000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_18291  two-component response regulator  39.2 
 
 
248 aa  75.9  0.0000000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.276613  n/a   
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  40.68 
 
 
326 aa  75.9  0.0000000000002  Salinispora tropica CNB-440  Bacteria  normal  normal  0.402703 
 
 
-
 
NC_008817  P9515_18081  two-component response regulator  39.68 
 
 
248 aa  75.9  0.0000000000002  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1278  sensory box protein/response regulator  40.5 
 
 
705 aa  75.1  0.0000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.517683  n/a   
 
 
-
 
NC_011773  BCAH820_1991  DNA-binding response regulator  37.61 
 
 
254 aa  75.1  0.0000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.9362699999999994e-45 
 
 
-
 
NC_009091  P9301_18111  two-component response regulator  38.4 
 
 
248 aa  75.5  0.0000000000003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  40.68 
 
 
326 aa  75.1  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0195  two component transcriptional regulator  40 
 
 
243 aa  75.1  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00716616 
 
 
-
 
NC_006274  BCZK1772  response regulator  37.61 
 
 
254 aa  75.1  0.0000000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4627  two component transcriptional regulator, LuxR family  41.67 
 
 
226 aa  75.5  0.0000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007412  Ava_C0162  response regulator receiver domain-containing protein  32.23 
 
 
127 aa  75.5  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_2074  two component transcriptional regulator  38.66 
 
 
231 aa  75.1  0.0000000000003  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0766  two component signal transduction response regulator  39.5 
 
 
121 aa  75.5  0.0000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  2.87435e-20  n/a   
 
 
-
 
NC_010513  Xfasm12_2163  response regulator receiver protein  38.66 
 
 
231 aa  75.1  0.0000000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2041  DNA-binding response regulator  37.93 
 
 
225 aa  74.7  0.0000000000004  Bacillus cereus ATCC 10987  Bacteria  normal  0.0972255  n/a   
 
 
-
 
NC_013501  Rmar_0776  response regulator receiver protein  38.33 
 
 
121 aa  74.7  0.0000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  0.428997  n/a   
 
 
-
 
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