Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5477 |
Symbol | phoB |
ID | 1187169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6236994 |
End bp | 6237683 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637396796 |
Product | phosphate regulon transcriptional regulatory protein PhoB |
Protein accession | NP_795201 |
Protein GI | 28872582 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGCA GGAGCATCCT GATCGTTGAC GACGAAGCGC CTATTCGTGA AATGATCGCC GTTGCGTTGG AAATGGCTGG ATACGACTGT ATTGAAGCCG AAAACTCTCA GCAGGCCCAC GCGATCATCG TCGACCGCAA GCCTGACCTT ATTCTGCTCG ACTGGATGCT GCCTGGCACA TCCGGCATCG AATTGGCCCG ACGCCTCAAA CGTGATGAGC TGACCGGGGA TATCCCGATC ATCATGCTCA CCGCCAAGGG CGAAGAGGAC AACAAGATCC AGGGCCTGGA AGTGGGCGCT GACGATTACA TCACCAAGCC GTTTTCGCCC CGCGAACTGG TTGCCCGCCT CAAGGCCGTG CTGCGCCGGG CCGGGCCGAC TGACGGAGAG TCCCCTATCG AAGTCGGCGG CTTGCTGCTC GACCCGATCA GCCACCGCGT CACCATCGAT GGCAAACCGG CAGAAATGGG CCCAACCGAA TACCGCCTGC TGCAATTTTT CATGACCCAT CAGGAGCGCG CTTACACACG TGGCCAGCTG CTGGATCAGG TCTGGGGCGG CAACGTGTAC GTCGAAGAGC GTACCGTCGA TGTCCACATT CGTCGCCTGC GCAAGGCCTT GGGTGATGCG TATGAAAATC TGGTACAAAC CGTGCGCGGC ACCGGCTATC GCTTTTCAAC GAAGAGCTGA
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Protein sequence | MAGRSILIVD DEAPIREMIA VALEMAGYDC IEAENSQQAH AIIVDRKPDL ILLDWMLPGT SGIELARRLK RDELTGDIPI IMLTAKGEED NKIQGLEVGA DDYITKPFSP RELVARLKAV LRRAGPTDGE SPIEVGGLLL DPISHRVTID GKPAEMGPTE YRLLQFFMTH QERAYTRGQL LDQVWGGNVY VEERTVDVHI RRLRKALGDA YENLVQTVRG TGYRFSTKS
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