| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5477 |
|---|
| Symbol | phoB |
|---|
| ID | 1187169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 6236994 |
|---|
| End bp | 6237683 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637396796 |
|---|
| Product | phosphate regulon transcriptional regulatory protein PhoB |
|---|
| Protein accession | NP_795201 |
|---|
| Protein GI | 28872582 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCA GGAGCATCCT GATCGTTGAC GACGAAGCGC CTATTCGTGA AATGATCGCC
GTTGCGTTGG AAATGGCTGG ATACGACTGT ATTGAAGCCG AAAACTCTCA GCAGGCCCAC
GCGATCATCG TCGACCGCAA GCCTGACCTT ATTCTGCTCG ACTGGATGCT GCCTGGCACA
TCCGGCATCG AATTGGCCCG ACGCCTCAAA CGTGATGAGC TGACCGGGGA TATCCCGATC
ATCATGCTCA CCGCCAAGGG CGAAGAGGAC AACAAGATCC AGGGCCTGGA AGTGGGCGCT
GACGATTACA TCACCAAGCC GTTTTCGCCC CGCGAACTGG TTGCCCGCCT CAAGGCCGTG
CTGCGCCGGG CCGGGCCGAC TGACGGAGAG TCCCCTATCG AAGTCGGCGG CTTGCTGCTC
GACCCGATCA GCCACCGCGT CACCATCGAT GGCAAACCGG CAGAAATGGG CCCAACCGAA
TACCGCCTGC TGCAATTTTT CATGACCCAT CAGGAGCGCG CTTACACACG TGGCCAGCTG
CTGGATCAGG TCTGGGGCGG CAACGTGTAC GTCGAAGAGC GTACCGTCGA TGTCCACATT
CGTCGCCTGC GCAAGGCCTT GGGTGATGCG TATGAAAATC TGGTACAAAC CGTGCGCGGC
ACCGGCTATC GCTTTTCAAC GAAGAGCTGA
|
|---|
| Protein sequence | MAGRSILIVD DEAPIREMIA VALEMAGYDC IEAENSQQAH AIIVDRKPDL ILLDWMLPGT
SGIELARRLK RDELTGDIPI IMLTAKGEED NKIQGLEVGA DDYITKPFSP RELVARLKAV
LRRAGPTDGE SPIEVGGLLL DPISHRVTID GKPAEMGPTE YRLLQFFMTH QERAYTRGQL
LDQVWGGNVY VEERTVDVHI RRLRKALGDA YENLVQTVRG TGYRFSTKS
|
|---|
| |