| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3838 |
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| Symbol | |
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| ID | 3966949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4838000 |
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| End bp | 4838704 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922935 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_529305 |
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| Protein GI | 90023478 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000539223 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGAAA AGACGATTTT AGTAGTTGAT GACGAGCCGC CAATTCGCGA CATGTTACGT
GTTGCACTGG AAATGGCAGA ATATGCGGTA TTGGAAGCCG GGGACGCACA ACAAGCACAC
AGCTTAATTG TCGATAAAAA ACCCGACCTC ATTTTATTAG ACTGGATGCT GCCAGGCACA
AGCGGTATTG AATTGGCCCG CCGCCTTAAG CGCGACGAAG TTACCAGTGA AATTCCTATT
ATTATGCTTA CCGCCAAAGG CGAAGAGGAT AATAAAGTAC AAGGCTTAGA GGTGGGTGCC
GACGATTACA TCACCAAGCC CTTCTCACCA CGTGAGCTAG TAGCGCGCCT AAAGGCCGTA
TTGCGTCGCA CCGACTCAAT GGGCATTAGC GAGCCTATTC AAGTAGAAGG CCTGTGCCTA
GACCCTATAA GCCACCGCGT AACCATTAGC GATATGCCTG TGCAAATGGG CCCTACAGAA
TACCGCCTAC TAGAATTCTT TCTTACCCAC CAAGAACGCG TTTACACCCG CAACCAATTG
CTCGACCACG TGTGGGGCGG CAATGTGTAT GTAGAAGAAC GCACGGTAGA TGTTCACATT
AGACGCTTGC GCAAAGCATT ATCCCTTGAA GGCCACGACC GTTTTATTCA AACTGTGCGT
GGTGCGGGTT ACCGCTTTTC TAATAAGGTC GCTCTAAAGG CCTAA
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| Protein sequence | MIEKTILVVD DEPPIRDMLR VALEMAEYAV LEAGDAQQAH SLIVDKKPDL ILLDWMLPGT
SGIELARRLK RDEVTSEIPI IMLTAKGEED NKVQGLEVGA DDYITKPFSP RELVARLKAV
LRRTDSMGIS EPIQVEGLCL DPISHRVTIS DMPVQMGPTE YRLLEFFLTH QERVYTRNQL
LDHVWGGNVY VEERTVDVHI RRLRKALSLE GHDRFIQTVR GAGYRFSNKV ALKA
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