Gene Daro_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3567 
Symbol 
ID3566379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3820914 
End bp3821600 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID637682040 
Productphosphate regulon transcriptional regulatory protein phoB 
Protein accessionYP_286766 
Protein GI71909179 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCCGA CGATCCTGGT CGTTGAAGAC GAACCGGCCA TTCAGGAACT CGTCACGATC 
AACCTCAAGC ACGCCGGCTT TCTGGTCGTT CGCGCCGGCA GCGCCGAGGA GGCCGAATCG
GCCATCCGCG CCGCCCTGCC TGACCTGGTG ATCCTCGACT GGATGCTGCC CGGCCAGTCC
GGCGTGGCAT TGGCCAAGAA AATCCGCGCC GACGAGCGGA CCCGCGAATT GCCGATCATC
ATGCTTACCG CCCGAGTCCA TGAAGAAGAC AAGGTGCAGG GCCTCGAAGC CGGCGCCGAC
GACTACATCA CCAAGCCATT CTCGCCCAAG GAAATGGTTG CCCGCGTCCG CGCCGTGCTG
CGTCGCCGCG CCCCACACCT TGCTGGCGAA GCAGTCGAGA TCGGCACCCT GGCGCTGAAC
CCGGCAACCC ATCGCGTGCT GGCCAGTGGT CAGCCGATCG AACTGGGACC CACCGAGTTC
CGCCTGCTCT TCTTCTTCAT GACCCATGCC GAGCGCGTCT ACACCCGCGC CCAGTTGCTC
GACGAAGTGT GGGGCGACCA TGTCTTCATC GAGGAACGCA CGGTCGATGT GCACATCCGC
CGCCTGCGCG CCGCCCTTGA AAACTCAGGC AATCACGAGC GGGTCGAAAC CGTGCGCGGC
ACTGGCTACC GCTTCCGGGG AGCCTGA
 
Protein sequence
MTPTILVVED EPAIQELVTI NLKHAGFLVV RAGSAEEAES AIRAALPDLV ILDWMLPGQS 
GVALAKKIRA DERTRELPII MLTARVHEED KVQGLEAGAD DYITKPFSPK EMVARVRAVL
RRRAPHLAGE AVEIGTLALN PATHRVLASG QPIELGPTEF RLLFFFMTHA ERVYTRAQLL
DEVWGDHVFI EERTVDVHIR RLRAALENSG NHERVETVRG TGYRFRGA