Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5606 |
Symbol | |
ID | 3717682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6277952 |
End bp | 6278641 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_351334 |
Protein GI | 77461827 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGGCA GGAGCATTCT GATCGTCGAC GACGAAGCGC CCATTCGCGA AATGATCGCC GTTGCGTTGG AAATGGCCGG CTATGACTGC CTCGAGGCAG AGAACTCGCA GCAGGCCCAC GCCATCATCG TCGACCGCAA GCCGGACCTG ATCCTGCTCG ACTGGATGCT GCCCGGCACC TCCGGCATCG AGCTGGCCCG CCGCCTCAAG CGTGACGAAC TGACCGGGGA CATCCCGATC ATCATGCTCA CCGCCAAGGG CGAAGAGGAC AACAAGATCC AGGGCCTGGA AGTCGGCGCC GACGACTACA TCACCAAACC GTTTTCCCCC CGCGAACTGG TGGCACGCCT CAAGGCCGTG CTGCGTCGCG CCGGCCCGAC CGATGGCGAA GCGCCGATCG AAGTCGGCGG CCTGCTGCTC GACCCGATCA GCCACCGCGT GACCATCGAC GGCCGTCCGG CCGAGATGGG CCCGACCGAA TACCGTCTGC TGCAATTCTT CATGACCCAC CAGGAGCGCG CCTACACCCG TGGCCAGTTG CTGGACCAGG TCTGGGGCGG CAACGTCTAT GTTGAAGAGC GCACCGTCGA CGTGCACATC CGGCGCCTGC GCAAGGCCCT CGGCGACGCC TACGAAAATC TGGTACAAAC CGTGCGCGGC ACCGGCTACC GGTTCTCCAC CAAGGCCTGA
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Protein sequence | MVGRSILIVD DEAPIREMIA VALEMAGYDC LEAENSQQAH AIIVDRKPDL ILLDWMLPGT SGIELARRLK RDELTGDIPI IMLTAKGEED NKIQGLEVGA DDYITKPFSP RELVARLKAV LRRAGPTDGE APIEVGGLLL DPISHRVTID GRPAEMGPTE YRLLQFFMTH QERAYTRGQL LDQVWGGNVY VEERTVDVHI RRLRKALGDA YENLVQTVRG TGYRFSTKA
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