| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2163 |
|---|
| Symbol | |
|---|
| ID | 6120134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 2271380 |
|---|
| End bp | 2272075 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641650101 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001776646 |
|---|
| Protein GI | 170731213 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAAAC GCGTCTTGAT TGTCGATGAT GAGGTGGCGA TTCGTGACAT GGTTGCTTTC
GCTTTGCGTA AGGGTGAATT TGAATCCTTG CAAGCCAGTG ATGCGCGCGA GGCTCAGGCC
GTTATCGCAG ATTGCGTTCC GGATTTGATT TTGTTGGATT GGATGCTGCC TGGTACCAGT
GGCCTGGAGT TGACACGTCG TTGGCGTAAA GCGTCGCTGA CCCGTGAAAT ACCTATCATC
ATGCTGACCG CGCGTAGTGA GGAGAATGAT CGGGTTGGTG GTTTGGAAGC GGGGGTGGAT
GATTATATGG TCAAGCCGTT CTCGGCACGC GAACTGTTGG CGCGCATCCG CGCGGTGATG
CGCCGTACTC GTGATGATGA GGAGGATGGT AGTGTTGCCA TTGGCAAATT ACGCATTGAT
GGTGCTGCGC ACCGTGTGTA TGCCGGTCAT GTGCAAGTGC CAATTGGTCC AACTGAATAC
CGCTTACTGC ATTTTTTCAT GACACATTCG GAGCGCGTGT ACTCGCGTAC TCAACTTTTA
GATCATGTTT GGGGTAGCGG CGTATATATA GAGGAGCGCA CGATTGATGT GCATATCCGC
CGTTTGCGTA GAACGTTGGA GCCATTCGGC CTTGACGATA TGGTGCAGAC GGTACGTAGT
GCCGGTTATC GCTTCTCAGG GGCGATCCAG ATCTGA
|
|---|
| Protein sequence | MQKRVLIVDD EVAIRDMVAF ALRKGEFESL QASDAREAQA VIADCVPDLI LLDWMLPGTS
GLELTRRWRK ASLTREIPII MLTARSEEND RVGGLEAGVD DYMVKPFSAR ELLARIRAVM
RRTRDDEEDG SVAIGKLRID GAAHRVYAGH VQVPIGPTEY RLLHFFMTHS ERVYSRTQLL
DHVWGSGVYI EERTIDVHIR RLRRTLEPFG LDDMVQTVRS AGYRFSGAIQ I
|
|---|
| |