Gene Ava_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0239 
Symbol 
ID3683003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp305373 
End bp305771 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content44% 
IMG OID637715567 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_320760 
Protein GI75906464 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATT TAACTATGAA CAACAAACGA ATTTTAGTGG TCGATAACGA GCAGTATATT 
CAAGAAGTTG CCAAGATTTG CTTGGAAACA GTTGCAGGCT GGGAGGTTGT CACAGCCAGT
TCAGGACAAG AAGGCATAAA TAAAGCCGAG ACTTACCAAC CAGATGCAAT TTTACTAGAT
GTGATGATGC CGGATATGGA TGGTATCGCT ACATTTGAGA AACTGCAAGC CAATTCCGTC
ACCCAAAAAA TACCAGTAAT CTTATTAACC GCCAAAATCC AAGCCTCTGA CCGTCGCCGC
TACTCCCAAT TGGGGATGGT GAGTGCGATC GCTAAACCCT TCAATCCGCT AGAATTAGCT
GGTCAAGTAG CCACCGCCCT TGGTTGGAAT TTAGCCTGA
 
Protein sequence
MTNLTMNNKR ILVVDNEQYI QEVAKICLET VAGWEVVTAS SGQEGINKAE TYQPDAILLD 
VMMPDMDGIA TFEKLQANSV TQKIPVILLT AKIQASDRRR YSQLGMVSAI AKPFNPLELA
GQVATALGWN LA