More than 300 homologs were found in PanDaTox collection
for query gene GSU2822 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU2822  response regulator  100 
 
 
191 aa  381  1e-105  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  84.74 
 
 
202 aa  330  8e-90  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  75 
 
 
188 aa  299  2e-80  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  62.5 
 
 
205 aa  251  6e-66  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  51.65 
 
 
195 aa  194  8.000000000000001e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  51.91 
 
 
194 aa  192  2e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  52.46 
 
 
194 aa  192  4e-48  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  52.17 
 
 
191 aa  191  5e-48  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  51.91 
 
 
197 aa  186  2e-46  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  48.39 
 
 
187 aa  182  3e-45  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  47.57 
 
 
210 aa  177  5.999999999999999e-44  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  47.57 
 
 
210 aa  177  5.999999999999999e-44  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  48.66 
 
 
194 aa  177  5.999999999999999e-44  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  47.57 
 
 
210 aa  177  5.999999999999999e-44  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  48.09 
 
 
204 aa  175  4e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  45.11 
 
 
226 aa  173  9.999999999999999e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  46.52 
 
 
199 aa  173  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  47.57 
 
 
205 aa  173  9.999999999999999e-43  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013595  Sros_2955  response regulator  48.63 
 
 
199 aa  173  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  43.72 
 
 
229 aa  171  6.999999999999999e-42  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  47.54 
 
 
207 aa  171  7.999999999999999e-42  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  45.9 
 
 
220 aa  171  7.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  45.99 
 
 
199 aa  170  1e-41  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  49.18 
 
 
197 aa  170  1e-41  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  45.95 
 
 
213 aa  170  1e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  46.99 
 
 
229 aa  169  2e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  44.26 
 
 
215 aa  169  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  46.99 
 
 
214 aa  169  2e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  44.81 
 
 
227 aa  169  2e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  48.09 
 
 
206 aa  167  9e-41  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  46.99 
 
 
206 aa  166  1e-40  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  46.11 
 
 
247 aa  165  2.9999999999999998e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  47.57 
 
 
200 aa  165  4e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  46.45 
 
 
200 aa  165  4e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  44.81 
 
 
212 aa  164  9e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  43.17 
 
 
220 aa  163  1.0000000000000001e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  41.27 
 
 
206 aa  162  2.0000000000000002e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  42.39 
 
 
229 aa  163  2.0000000000000002e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  44.26 
 
 
201 aa  160  1e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  44.26 
 
 
201 aa  160  1e-38  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  44.75 
 
 
189 aa  160  1e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  46.45 
 
 
207 aa  159  2e-38  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  43.72 
 
 
210 aa  158  4e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  48.09 
 
 
207 aa  158  5e-38  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  44.75 
 
 
205 aa  155  4e-37  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  43.89 
 
 
198 aa  154  7e-37  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  40.64 
 
 
196 aa  148  5e-35  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  40.22 
 
 
196 aa  146  2.0000000000000003e-34  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  39.67 
 
 
194 aa  145  5e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  40.54 
 
 
220 aa  144  7.0000000000000006e-34  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  40.76 
 
 
194 aa  143  2e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  40.76 
 
 
194 aa  142  3e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  40 
 
 
192 aa  135  3.0000000000000003e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  36.81 
 
 
198 aa  132  3.9999999999999996e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  37.02 
 
 
195 aa  131  6.999999999999999e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  39.13 
 
 
208 aa  130  1.0000000000000001e-29  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_011146  Gbem_3279  response regulator receiver and ANTAR domain protein  42.78 
 
 
191 aa  130  1.0000000000000001e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  35.68 
 
 
191 aa  130  2.0000000000000002e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  35.68 
 
 
198 aa  129  4.0000000000000003e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  38.46 
 
 
242 aa  128  4.0000000000000003e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  35.91 
 
 
221 aa  127  1.0000000000000001e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_012918  GM21_0970  response regulator receiver and ANTAR domain protein  42.25 
 
 
191 aa  126  2.0000000000000002e-28  Geobacter sp. M21  Bacteria  n/a    normal  0.772223 
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  35.6 
 
 
203 aa  124  7e-28  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  34.81 
 
 
194 aa  122  3e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  33.66 
 
 
249 aa  120  9.999999999999999e-27  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  34.8 
 
 
261 aa  119  3e-26  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  35.83 
 
 
192 aa  117  7.999999999999999e-26  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  35.71 
 
 
191 aa  107  8.000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  35.68 
 
 
243 aa  106  2e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  35.09 
 
 
198 aa  106  2e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  33.7 
 
 
218 aa  105  3e-22  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_013385  Adeg_1890  response regulator receiver and ANTAR domain protein  34.03 
 
 
197 aa  103  2e-21  Ammonifex degensii KC4  Bacteria  normal  0.0366782  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  32.6 
 
 
190 aa  102  3e-21  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  31.89 
 
 
191 aa  100  1e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_009485  BBta_4139  response regulator receiver/ANTAR domain-containing protein  28.18 
 
 
196 aa  96.7  2e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.214536 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  44.74 
 
 
355 aa  96.7  2e-19  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  27.07 
 
 
195 aa  95.9  3e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  38.4 
 
 
131 aa  95.5  4e-19  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  37.39 
 
 
143 aa  95.1  6e-19  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  39.84 
 
 
352 aa  95.1  6e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  28.65 
 
 
191 aa  94.7  7e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  39.26 
 
 
386 aa  94.4  1e-18  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  26.23 
 
 
196 aa  93.2  2e-18  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  26.37 
 
 
207 aa  92  4e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  40.14 
 
 
636 aa  92  5e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  27.47 
 
 
195 aa  92  5e-18  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  25.82 
 
 
195 aa  90.9  1e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  26.37 
 
 
196 aa  90.9  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2506  response regulator receiver/ANTAR domain-containing protein  28.18 
 
 
221 aa  90.5  1e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187461  normal 
 
 
-
 
NC_003910  CPS_3317  putative response regulator NasT  26.92 
 
 
201 aa  87.8  1e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.0234612  n/a   
 
 
-
 
NC_007484  Noc_1494  response regulator  31.49 
 
 
194 aa  87  1e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  36.5 
 
 
953 aa  87.4  1e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  30.05 
 
 
191 aa  87  2e-16  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  29.71 
 
 
191 aa  87  2e-16  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  28.04 
 
 
194 aa  86.7  2e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  41.8 
 
 
211 aa  86.3  3e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  35.07 
 
 
159 aa  85.5  4e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  36.5 
 
 
336 aa  84.7  8e-16  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  34.04 
 
 
429 aa  84  0.000000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  30.39 
 
 
192 aa  83.6  0.000000000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
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