More than 300 homologs were found in PanDaTox collection
for query gene Franean1_5643 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_5643  two component LuxR family transcriptional regulator  100 
 
 		 203 aa  403  1.0000000000000001e-112  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  57.07 
 
 		 238 aa  209  2e-53  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  56.65 
 
 		 250 aa  209  2e-53  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  53.2 
 
 		 237 aa  209  2e-53  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  52.22 
 
 		 237 aa  204  8e-52  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  52.45 
 
 		 234 aa  202  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  52.45 
 
 		 234 aa  200  9.999999999999999e-51  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  50.73 
 
 		 253 aa  193  1e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  48.53 
 
 		 303 aa  186  1e-46  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  49.49 
 
 		 241 aa  179  2.9999999999999997e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  50 
 
 		 236 aa  179  2.9999999999999997e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  51.5 
 
 		 242 aa  177  8e-44  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  47.74 
 
 		 213 aa  171  1e-41  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  44.76 
 
 		 225 aa  162  4.0000000000000004e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  40.7 
 
 		 219 aa  151  8e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  40.4 
 
 		 216 aa  147  9e-35  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  41.18 
 
 		 220 aa  145  4.0000000000000006e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  41.54 
 
 		 211 aa  144  9e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  43.5 
 
 		 223 aa  143  1e-33  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  39.39 
 
 		 218 aa  142  3e-33  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  42.49 
 
 		 212 aa  141  6e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  42.57 
 
 		 222 aa  141  8e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  41.5 
 
 		 218 aa  140  9e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  40 
 
 		 218 aa  140  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  37.88 
 
 		 215 aa  139  3e-32  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  37.88 
 
 		 215 aa  139  3e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  37.88 
 
 		 215 aa  139  3e-32  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  41.09 
 
 		 229 aa  139  3e-32  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  37.88 
 
 		 215 aa  139  3e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  37.88 
 
 		 215 aa  139  3e-32  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  37.88 
 
 		 215 aa  139  3e-32  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  37.88 
 
 		 215 aa  139  3.9999999999999997e-32  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  42.78 
 
 		 208 aa  138  6e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  41.62 
 
 		 216 aa  137  7.999999999999999e-32  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  42.5 
 
 		 217 aa  137  1e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  36.73 
 
 		 216 aa  137  1e-31  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  40.91 
 
 		 224 aa  137  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  37.37 
 
 		 215 aa  137  2e-31  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  39.39 
 
 		 218 aa  135  3.0000000000000003e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  42.21 
 
 		 217 aa  135  3.0000000000000003e-31  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  40.61 
 
 		 217 aa  136  3.0000000000000003e-31  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  36.87 
 
 		 215 aa  135  4e-31  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  39.29 
 
 		 216 aa  135  4e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  37.37 
 
 		 215 aa  135  4e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  41.24 
 
 		 216 aa  135  6.0000000000000005e-31  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  40.51 
 
 		 239 aa  134  8e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.377169 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  40.41 
 
 		 207 aa  134  9e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  41 
 
 		 239 aa  134  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  39.39 
 
 		 231 aa  133  9.999999999999999e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39 
 
 		 222 aa  134  9.999999999999999e-31  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  41.5 
 
 		 226 aa  134  9.999999999999999e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  40.61 
 
 		 218 aa  134  9.999999999999999e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  38.58 
 
 		 218 aa  133  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  38.78 
 
 		 215 aa  133  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  40 
 
 		 219 aa  132  3e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  35.23 
 
 		 208 aa  132  3.9999999999999996e-30  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  40 
 
 		 218 aa  132  3.9999999999999996e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  40.93 
 
 		 214 aa  132  5e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  39.11 
 
 		 219 aa  131  6e-30  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  37.62 
 
 		 219 aa  131  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  39.18 
 
 		 217 aa  131  7.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  38.61 
 
 		 234 aa  130  9e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  40.82 
 
 		 218 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  39.59 
 
 		 221 aa  130  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  41.84 
 
 		 228 aa  130  1.0000000000000001e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  41.24 
 
 		 213 aa  130  1.0000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  40.29 
 
 		 230 aa  130  1.0000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  40.1 
 
 		 219 aa  130  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  41.79 
 
 		 226 aa  129  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  34.87 
 
 		 220 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  42.27 
 
 		 220 aa  130  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  38.34 
 
 		 224 aa  130  2.0000000000000002e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  35.89 
 
 		 228 aa  129  3e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  38.27 
 
 		 222 aa  129  4.0000000000000003e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.89 
 
 		 222 aa  128  6e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  40.61 
 
 		 221 aa  128  6e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  37.5 
 
 		 219 aa  128  6e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  38.66 
 
 		 209 aa  128  6e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  39.71 
 
 		 223 aa  128  7.000000000000001e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  38.12 
 
 		 220 aa  128  7.000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  42.56 
 
 		 221 aa  128  7.000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  37.24 
 
 		 227 aa  127  8.000000000000001e-29  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.6 
 
 		 225 aa  127  9.000000000000001e-29  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  40.51 
 
 		 215 aa  127  9.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  39.9 
 
 		 206 aa  127  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  39.49 
 
 		 227 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  39.59 
 
 		 220 aa  127  1.0000000000000001e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  40.93 
 
 		 209 aa  127  1.0000000000000001e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  42.05 
 
 		 221 aa  127  1.0000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  41.79 
 
 		 227 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  41.97 
 
 		 212 aa  127  2.0000000000000002e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  38.61 
 
 		 221 aa  127  2.0000000000000002e-28  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  41.43 
 
 		 220 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  37.37 
 
 		 219 aa  126  2.0000000000000002e-28  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.69 
 
 		 239 aa  126  2.0000000000000002e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  34.78 
 
 		 228 aa  126  2.0000000000000002e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  37.37 
 
 		 219 aa  126  2.0000000000000002e-28  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  39.8 
 
 		 222 aa  126  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  38.46 
 
 		 218 aa  126  2.0000000000000002e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  40.7 
 
 		 230 aa  126  2.0000000000000002e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
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