| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5643 |
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| Symbol | |
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| ID | 5673970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6856414 |
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| End bp | 6857025 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641244497 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001509900 |
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| Protein GI | 158317392 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCGC CGATTCGTGT CCTTGTCGTC GACGACCACG TGCTTTCCCG TCGCGAGCTG
GAGGTGGCGC TGGCGGCCGA GGCCGACATC GAGGTCGTGG GCAGCGCGGT GAACAGCCCG
GCGGCCGTGA CGCTCGGCTC CGAATCTCGT CCGGATGTTG CGCTCGTGGA TGTCGAAGAG
CCACACGAAG ACGGCATTCG TGCAGTGAGT GCGATCAAGC GTGCTGTTTC ACCCGTGCGG
ATCCTGATAT TGGCGACGAG TGACGATGAA GCTCACCTTT TCGGTGCCGT CAGGGCGGGT
GCCGTGGGCT ACCTGTTGAA GCCGCGGCCG ATGGACGAGC TCACTGCGGC CGTCCGGTCG
GTTCACAATG GGGTGAGCAT CATCGGTCCG GGAGTGGCAT CGCAGGTCAT GAAAGAATTC
GCCGCCATGG CACGCTCGGA AAAGTCGCCG GCAATGCCAC ACCTTACCGT CCGCGAGTTG
GATGTTCTCA AGCTCATGGT CGGGGGGTGC GCGAACCAGG GGATTTCTCG CCGCCTGTTG
ATCAGTGAGA ACACGGTGAA AAATCATATC CGGAACATCC TGGAGAAGCT CCAGTTCTCG
GCCTGGATGT GA
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| Protein sequence | MSAPIRVLVV DDHVLSRREL EVALAAEADI EVVGSAVNSP AAVTLGSESR PDVALVDVEE
PHEDGIRAVS AIKRAVSPVR ILILATSDDE AHLFGAVRAG AVGYLLKPRP MDELTAAVRS
VHNGVSIIGP GVASQVMKEF AAMARSEKSP AMPHLTVREL DVLKLMVGGC ANQGISRRLL
ISENTVKNHI RNILEKLQFS AWM
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