More than 300 homologs were found in PanDaTox collection
for query gene Bpro_2167 on replicon NC_007948
Organism: Polaromonas sp. JS666



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  56.48 
 
 
684 aa  680    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  79.44 
 
 
682 aa  1105    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  56.6 
 
 
667 aa  715    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  54.73 
 
 
668 aa  673    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  79 
 
 
682 aa  1088    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  69.06 
 
 
662 aa  908    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  66.33 
 
 
678 aa  879    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  56.33 
 
 
671 aa  694    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  78.12 
 
 
682 aa  1082    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  56.03 
 
 
666 aa  703    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  55.67 
 
 
671 aa  699    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  57.25 
 
 
669 aa  715    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  68.62 
 
 
667 aa  892    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  56.16 
 
 
667 aa  714    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  53.77 
 
 
671 aa  669    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  56.16 
 
 
667 aa  707    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  55.78 
 
 
695 aa  703    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  66.47 
 
 
678 aa  880    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  56.66 
 
 
666 aa  721    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  56.58 
 
 
667 aa  693    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  76.28 
 
 
675 aa  1046    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  53.76 
 
 
652 aa  662    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  58.48 
 
 
662 aa  760    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  55.96 
 
 
671 aa  699    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  54.2 
 
 
673 aa  667    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  55.78 
 
 
666 aa  705    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  79.74 
 
 
682 aa  1108    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  54.26 
 
 
680 aa  689    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  83.19 
 
 
684 aa  1170    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  55.33 
 
 
671 aa  679    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  54.73 
 
 
669 aa  678    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  57.37 
 
 
667 aa  682    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  54.84 
 
 
671 aa  699    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  100 
 
 
682 aa  1394    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  75.4 
 
 
691 aa  1045    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  56.18 
 
 
685 aa  735    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  56.1 
 
 
675 aa  701    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  54.48 
 
 
681 aa  691    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  56.1 
 
 
691 aa  682    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  57.1 
 
 
671 aa  692    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  57.08 
 
 
673 aa  703    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  89.28 
 
 
682 aa  1245    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  55.46 
 
 
676 aa  713    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  54.89 
 
 
668 aa  676    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  55.25 
 
 
660 aa  674    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  80.18 
 
 
682 aa  1123    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  56.48 
 
 
667 aa  681    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  55.13 
 
 
670 aa  686    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  54.9 
 
 
667 aa  677    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  56.32 
 
 
671 aa  722    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  56.07 
 
 
673 aa  695    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  55.41 
 
 
670 aa  696    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  54.09 
 
 
668 aa  654    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  54.12 
 
 
669 aa  675    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  75.48 
 
 
696 aa  1048    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  52.37 
 
 
669 aa  638    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  45.26 
 
 
655 aa  562  1.0000000000000001e-159  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  44.1 
 
 
656 aa  553  1e-156  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  42.98 
 
 
691 aa  527  1e-148  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  46.62 
 
 
667 aa  523  1e-147  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  43.24 
 
 
665 aa  523  1e-147  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  55.95 
 
 
450 aa  505  9.999999999999999e-143  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  54.63 
 
 
498 aa  504  1e-141  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.01 
 
 
674 aa  498  1e-139  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  45.53 
 
 
712 aa  493  9.999999999999999e-139  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  58.76 
 
 
666 aa  494  9.999999999999999e-139  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A1587  pyruvate carboxylase subunit A  55.07 
 
 
493 aa  493  9.999999999999999e-139  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.482835  normal 
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.22 
 
 
668 aa  493  9.999999999999999e-139  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008553  Mthe_0794  pyruvate carboxylase subunit A  53.86 
 
 
499 aa  495  9.999999999999999e-139  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_011071  Smal_0196  Carbamoyl-phosphate synthase L chain ATP-binding  44.49 
 
 
660 aa  490  1e-137  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.469913  normal 
 
 
-
 
NC_011981  Avi_7691  acetyl-CoA carboxylase biotin carboxylase  44.79 
 
 
662 aa  489  1e-137  Agrobacterium vitis S4  Bacteria  normal  0.817206  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  55.16 
 
 
450 aa  489  1e-137  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_1065  acetyl-CoA carboxylase, biotin carboxylase  53.44 
 
 
448 aa  487  1e-136  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000015139  n/a   
 
 
-
 
NC_007204  Psyc_0311  3-methylcrotonoyl-CoA carboxylase, alpha subunit  41.92 
 
 
706 aa  487  1e-136  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4351  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.22 
 
 
677 aa  486  1e-136  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0319  carbamoyl-phosphate synthase L chain, ATP-binding  41.22 
 
 
689 aa  488  1e-136  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  53.42 
 
 
480 aa  482  1e-135  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_009505  BOV_0015  biotin carboxylase  44.91 
 
 
673 aa  482  1e-135  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0434  carbamoyl-phosphate synthase L chain, ATP-binding  42.86 
 
 
659 aa  485  1e-135  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.321717 
 
 
-
 
NC_007951  Bxe_A2760  putative biotin carboxylase subunit of acetyl-CoA carboxylase  44.61 
 
 
681 aa  485  1e-135  Burkholderia xenovorans LB400  Bacteria  normal  0.868183  normal  0.518903 
 
 
-
 
NC_007969  Pcryo_0342  carbamoyl-phosphate synthase L chain, ATP-binding  43 
 
 
704 aa  484  1e-135  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2730  carbamoyl-phosphate synthase L chain, ATP-binding  41.86 
 
 
676 aa  483  1e-135  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4585  carbamoyl-phosphate synthase L chain, ATP-binding  45.66 
 
 
666 aa  482  1e-135  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.747689 
 
 
-
 
NC_009483  Gura_1826  acetyl-CoA carboxylase, biotin carboxylase  52.33 
 
 
446 aa  481  1e-134  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000136846  n/a   
 
 
-
 
NC_002939  GSU2019  acetyl-CoA carboxylase, biotin carboxylase  52.11 
 
 
446 aa  481  1e-134  Geobacter sulfurreducens PCA  Bacteria  normal  0.274625  n/a   
 
 
-
 
NC_003909  BCE_4257  acetyl-CoA carboxylase biotin carboxylase subunit  52.75 
 
 
450 aa  479  1e-134  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  53.55 
 
 
681 aa  481  1e-134  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4088  acetyl-CoA carboxylase biotin carboxylase subunit  52.75 
 
 
450 aa  479  1e-134  Bacillus anthracis str. Sterne  Bacteria  normal  0.857492  n/a   
 
 
-
 
NC_006274  BCZK3937  acetyl-CoA carboxylase biotin carboxylase subunit  52.75 
 
 
450 aa  479  1e-134  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4314  acetyl-CoA carboxylase biotin carboxylase subunit  52.75 
 
 
450 aa  479  1e-134  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4204  acetyl-CoA carboxylase biotin carboxylase subunit  52.75 
 
 
450 aa  479  1e-134  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000322811 
 
 
-
 
NC_010552  BamMC406_5118  carbamoyl-phosphate synthase L chain ATP-binding  45.52 
 
 
666 aa  481  1e-134  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  42.24 
 
 
653 aa  480  1e-134  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_007517  Gmet_0984  biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha  52.55 
 
 
446 aa  479  1e-134  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000016105  normal  0.0128167 
 
 
-
 
NC_007530  GBAA_4408  acetyl-CoA carboxylase biotin carboxylase subunit  52.75 
 
 
450 aa  479  1e-134  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5035  carbamoyl-phosphate synthase L chain ATP-binding  44.48 
 
 
665 aa  480  1e-134  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.70526  normal 
 
 
-
 
NC_011725  BCB4264_A4294  acetyl-CoA carboxylase biotin carboxylase subunit  52.75 
 
 
450 aa  479  1e-134  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  42.39 
 
 
643 aa  482  1e-134  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5237  carbamoyl-phosphate synthase L chain, ATP-binding  44.62 
 
 
665 aa  481  1e-134  Burkholderia cenocepacia HI2424  Bacteria  normal  0.578975  normal  0.758885 
 
 
-
 
NC_008061  Bcen_3130  carbamoyl-phosphate synthase L chain, ATP-binding  44.62 
 
 
665 aa  481  1e-134  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
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