More than 300 homologs were found in PanDaTox collection
for query gene Bfae_14760 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  100 
 
 
402 aa  810    Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  64.57 
 
 
394 aa  487  1e-136  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  59.9 
 
 
428 aa  479  1e-134  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  60.45 
 
 
413 aa  480  1e-134  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  62.37 
 
 
420 aa  472  1e-132  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  60.86 
 
 
420 aa  470  1.0000000000000001e-131  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  59.26 
 
 
423 aa  467  9.999999999999999e-131  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  59.79 
 
 
407 aa  464  1e-129  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  62.23 
 
 
400 aa  464  1e-129  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  57.39 
 
 
414 aa  462  1e-129  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  60.41 
 
 
405 aa  460  9.999999999999999e-129  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  59.95 
 
 
405 aa  459  9.999999999999999e-129  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  61.73 
 
 
377 aa  451  1.0000000000000001e-126  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  60.75 
 
 
392 aa  454  1.0000000000000001e-126  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  60.78 
 
 
395 aa  451  1e-125  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  61.41 
 
 
372 aa  446  1.0000000000000001e-124  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  60.7 
 
 
388 aa  445  1.0000000000000001e-124  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  56.81 
 
 
403 aa  441  9.999999999999999e-123  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  58.13 
 
 
378 aa  433  1e-120  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  58.46 
 
 
397 aa  432  1e-120  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  58.18 
 
 
397 aa  428  1e-119  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  57.45 
 
 
397 aa  429  1e-119  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  60.59 
 
 
378 aa  429  1e-119  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  55.7 
 
 
416 aa  424  1e-117  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  58.11 
 
 
378 aa  422  1e-117  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  58.42 
 
 
370 aa  424  1e-117  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  56.96 
 
 
386 aa  421  1e-116  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  56.4 
 
 
404 aa  420  1e-116  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  57.87 
 
 
386 aa  420  1e-116  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  56.67 
 
 
387 aa  417  9.999999999999999e-116  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  56.67 
 
 
387 aa  417  9.999999999999999e-116  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  56.41 
 
 
387 aa  415  9.999999999999999e-116  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  53.56 
 
 
412 aa  414  1e-114  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  54.09 
 
 
421 aa  409  1e-113  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  57.48 
 
 
378 aa  405  1.0000000000000001e-112  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  55.61 
 
 
376 aa  398  9.999999999999999e-111  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  55.91 
 
 
376 aa  390  1e-107  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  54.76 
 
 
387 aa  386  1e-106  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  50.77 
 
 
386 aa  342  5e-93  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  49.74 
 
 
386 aa  338  9.999999999999999e-92  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  45.53 
 
 
440 aa  333  3e-90  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  46.34 
 
 
379 aa  328  9e-89  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  45.1 
 
 
381 aa  328  9e-89  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  46.19 
 
 
384 aa  325  9e-88  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  45.88 
 
 
376 aa  323  4e-87  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  45.57 
 
 
379 aa  322  6e-87  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  45.55 
 
 
382 aa  322  9.999999999999999e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  45.57 
 
 
381 aa  321  1.9999999999999998e-86  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  48.2 
 
 
374 aa  320  3e-86  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  45.9 
 
 
379 aa  319  6e-86  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  45.71 
 
 
416 aa  319  6e-86  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007984  BCI_0559  carbamoyl-phosphate synthase, small subunit  42.78 
 
 
381 aa  318  1e-85  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  44.96 
 
 
390 aa  317  3e-85  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_010468  EcolC_3623  carbamoyl phosphate synthase small subunit  45.45 
 
 
382 aa  317  3e-85  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.314254 
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  43.83 
 
 
387 aa  317  3e-85  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  44.53 
 
 
381 aa  316  4e-85  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
CP001509  ECD_00036  carbamoyl-phosphate synthase small subunit  45.45 
 
 
382 aa  315  7e-85  Escherichia coli BL21(DE3)  Bacteria  normal  0.53844  n/a   
 
 
-
 
CP001637  EcDH1_3567  carbamoyl-phosphate synthase, small subunit  45.45 
 
 
382 aa  315  7e-85  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  45.6 
 
 
391 aa  315  7e-85  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_011353  ECH74115_0035  carbamoyl phosphate synthase small subunit  45.45 
 
 
382 aa  315  7e-85  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E0036  carbamoyl phosphate synthase small subunit  45.45 
 
 
382 aa  315  7e-85  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0035  carbamoyl phosphate synthase small subunit  45.45 
 
 
382 aa  315  7e-85  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0033  carbamoyl phosphate synthase small subunit  45.45 
 
 
382 aa  315  7e-85  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00035  hypothetical protein  45.45 
 
 
382 aa  315  7e-85  Escherichia coli BL21  Bacteria  normal  0.457385  n/a   
 
 
-
 
NC_010498  EcSMS35_0032  carbamoyl phosphate synthase small subunit  45.45 
 
 
391 aa  315  8e-85  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  43.82 
 
 
357 aa  315  9.999999999999999e-85  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  43.93 
 
 
385 aa  314  1.9999999999999998e-84  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  45.22 
 
 
386 aa  314  1.9999999999999998e-84  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  44.33 
 
 
387 aa  314  1.9999999999999998e-84  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  44.19 
 
 
391 aa  314  1.9999999999999998e-84  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  44.68 
 
 
367 aa  313  2.9999999999999996e-84  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  43.08 
 
 
376 aa  313  2.9999999999999996e-84  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  44.19 
 
 
386 aa  313  3.9999999999999997e-84  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  44.33 
 
 
396 aa  312  6.999999999999999e-84  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  44.56 
 
 
382 aa  311  9e-84  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  44.19 
 
 
386 aa  311  1e-83  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  44.3 
 
 
382 aa  311  1e-83  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  44.96 
 
 
391 aa  311  1e-83  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  45.11 
 
 
359 aa  311  1e-83  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  47.31 
 
 
359 aa  311  1e-83  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  44.96 
 
 
386 aa  311  2e-83  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  42.2 
 
 
383 aa  310  2e-83  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  44.96 
 
 
386 aa  310  2e-83  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal 
 
 
-
 
NC_013421  Pecwa_3841  carbamoyl phosphate synthase small subunit  44.64 
 
 
382 aa  311  2e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  44.3 
 
 
391 aa  311  2e-83  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  44.3 
 
 
382 aa  310  2.9999999999999997e-83  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  43.75 
 
 
381 aa  310  2.9999999999999997e-83  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  44.7 
 
 
386 aa  310  2.9999999999999997e-83  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  44.05 
 
 
382 aa  309  4e-83  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0784  carbamoyl phosphate synthase small subunit  44.56 
 
 
391 aa  310  4e-83  Yersinia pestis Angola  Bacteria  normal  0.594963  normal  0.491126 
 
 
-
 
NC_009708  YpsIP31758_3454  carbamoyl phosphate synthase small subunit  44.56 
 
 
391 aa  309  5.9999999999999995e-83  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  45.04 
 
 
369 aa  308  6.999999999999999e-83  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  44.7 
 
 
386 aa  308  8e-83  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal 
 
 
-
 
NC_010465  YPK_3583  carbamoyl phosphate synthase small subunit  44.3 
 
 
391 aa  308  1.0000000000000001e-82  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0612  carbamoyl-phosphate synthase, small subunit  42.75 
 
 
417 aa  308  1.0000000000000001e-82  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.348525 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  45.09 
 
 
388 aa  308  1.0000000000000001e-82  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  44.27 
 
 
385 aa  308  1.0000000000000001e-82  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  44.42 
 
 
379 aa  308  1.0000000000000001e-82  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  43.23 
 
 
381 aa  307  2.0000000000000002e-82  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  44.01 
 
 
381 aa  307  2.0000000000000002e-82  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
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