More than 300 homologs were found in PanDaTox collection
for query gene Bcav_2188 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_2188  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  422  1e-117  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.546074  normal 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  48.8 
 
 
213 aa  162  4.0000000000000004e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  156  2e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3326  two component transcriptional regulator, LuxR family  48.61 
 
 
223 aa  155  3e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  46.53 
 
 
220 aa  148  5e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  45.73 
 
 
216 aa  147  1.0000000000000001e-34  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  41.79 
 
 
214 aa  144  9e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  39.71 
 
 
224 aa  144  1e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  47.39 
 
 
221 aa  142  4e-33  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  45.89 
 
 
227 aa  141  6e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  41.15 
 
 
227 aa  141  6e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  41.83 
 
 
221 aa  141  7e-33  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  42.79 
 
 
208 aa  141  8e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  43 
 
 
217 aa  141  8e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  41.12 
 
 
224 aa  140  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_3835  two component LuxR family transcriptional regulator  48.08 
 
 
217 aa  140  9.999999999999999e-33  Frankia sp. EAN1pec  Bacteria  normal  0.760782  normal  0.0940778 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  44 
 
 
217 aa  139  1.9999999999999998e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  42.5 
 
 
207 aa  139  3e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  43.43 
 
 
217 aa  139  3.9999999999999997e-32  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  46.19 
 
 
215 aa  139  4.999999999999999e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  40.3 
 
 
215 aa  138  7.999999999999999e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  39.11 
 
 
216 aa  137  8.999999999999999e-32  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  42.57 
 
 
241 aa  137  8.999999999999999e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  43 
 
 
207 aa  137  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  39.3 
 
 
215 aa  136  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  41.62 
 
 
218 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  43.96 
 
 
220 aa  136  2e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  43.08 
 
 
207 aa  137  2e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  39.8 
 
 
215 aa  136  3.0000000000000003e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  40.3 
 
 
215 aa  135  3.0000000000000003e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  40.3 
 
 
215 aa  135  5e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  40.3 
 
 
215 aa  135  5e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  40.3 
 
 
215 aa  135  5e-31  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  40.3 
 
 
215 aa  135  5e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  40.3 
 
 
215 aa  135  5e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  43.06 
 
 
215 aa  135  6.0000000000000005e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  40 
 
 
216 aa  135  6.0000000000000005e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  40.91 
 
 
213 aa  134  9.999999999999999e-31  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  39.72 
 
 
219 aa  134  9.999999999999999e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  43.88 
 
 
222 aa  134  9.999999999999999e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  39.8 
 
 
215 aa  133  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  43.15 
 
 
212 aa  134  1.9999999999999998e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  46.73 
 
 
219 aa  133  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1427  two component LuxR family transcriptional regulator  40.48 
 
 
212 aa  133  1.9999999999999998e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  40.76 
 
 
217 aa  133  1.9999999999999998e-30  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  43 
 
 
225 aa  133  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  38.5 
 
 
209 aa  132  3e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  44.66 
 
 
210 aa  132  3e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  39.9 
 
 
234 aa  133  3e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.5 
 
 
216 aa  133  3e-30  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  40.7 
 
 
211 aa  132  3.9999999999999996e-30  Frankia sp. EAN1pec  Bacteria  normal  normal  0.265588 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  42.18 
 
 
216 aa  132  3.9999999999999996e-30  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_013595  Sros_1446  response regulator receiver protein  44.02 
 
 
209 aa  132  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0167897  normal  0.0778626 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  42.16 
 
 
236 aa  132  3.9999999999999996e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  42.42 
 
 
228 aa  132  5e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  39.11 
 
 
237 aa  132  5e-30  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  42.79 
 
 
216 aa  132  6e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  41.43 
 
 
217 aa  131  6.999999999999999e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  38.61 
 
 
232 aa  131  6.999999999999999e-30  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  40.69 
 
 
223 aa  131  7.999999999999999e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  42.5 
 
 
214 aa  131  7.999999999999999e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.43 
 
 
239 aa  130  1.0000000000000001e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.711047 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  38.61 
 
 
232 aa  131  1.0000000000000001e-29  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  42.79 
 
 
220 aa  131  1.0000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.55611 
 
 
-
 
NC_009338  Mflv_3847  two component LuxR family transcriptional regulator  38.86 
 
 
216 aa  131  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.118356  decreased coverage  0.00872558 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  40.49 
 
 
219 aa  130  1.0000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  37.56 
 
 
222 aa  130  2.0000000000000002e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  38.54 
 
 
217 aa  130  2.0000000000000002e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  34.83 
 
 
219 aa  130  2.0000000000000002e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  41.58 
 
 
210 aa  130  2.0000000000000002e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  44.72 
 
 
218 aa  130  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  45.75 
 
 
225 aa  130  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  40.1 
 
 
232 aa  129  3e-29  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  40.98 
 
 
215 aa  129  3e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  38.61 
 
 
237 aa  129  3e-29  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  43 
 
 
206 aa  129  3e-29  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  39.9 
 
 
208 aa  129  3e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  40.29 
 
 
221 aa  129  3e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  42.86 
 
 
219 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  43.65 
 
 
216 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.17 
 
 
222 aa  129  3e-29  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  37.26 
 
 
236 aa  129  3e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.72 
 
 
216 aa  129  4.0000000000000003e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.657091 
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  37.69 
 
 
218 aa  129  4.0000000000000003e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  37.32 
 
 
211 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  42.11 
 
 
224 aa  129  4.0000000000000003e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  40.2 
 
 
213 aa  129  4.0000000000000003e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  40 
 
 
218 aa  129  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2482  two component transcriptional regulator, LuxR family  37.93 
 
 
211 aa  129  4.0000000000000003e-29  Dickeya dadantii Ech703  Bacteria  normal  0.46622  n/a   
 
 
-
 
NC_011886  Achl_2073  two component transcriptional regulator, LuxR family  36.36 
 
 
226 aa  129  4.0000000000000003e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000764485 
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  40 
 
 
217 aa  129  4.0000000000000003e-29  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  42.13 
 
 
209 aa  129  4.0000000000000003e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  42.72 
 
 
226 aa  128  5.0000000000000004e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  37.19 
 
 
209 aa  129  5.0000000000000004e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  35.92 
 
 
226 aa  128  7.000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  37.02 
 
 
242 aa  128  7.000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  39.41 
 
 
212 aa  128  7.000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  normal  0.967001 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  42.71 
 
 
235 aa  128  7.000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.42 
 
 
253 aa  128  8.000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  37.85 
 
 
219 aa  128  8.000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
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