More than 300 homologs were found in PanDaTox collection
for query gene Amir_2930 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2930  transcriptional regulator, LuxR family  100 
 
 
208 aa  408  1e-113  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_013093  Amir_5376  transcriptional regulator, LuxR family  45.41 
 
 
213 aa  170  2e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.416669  n/a   
 
 
-
 
NC_014151  Cfla_2255  transcriptional regulator, LuxR family  47.32 
 
 
207 aa  161  7e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0543436  hitchhiker  0.000519578 
 
 
-
 
NC_013235  Namu_1891  transcriptional regulator, LuxR family  47.8 
 
 
230 aa  160  1e-38  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00164243  normal  0.142555 
 
 
-
 
NC_009077  Mjls_0940  response regulator receiver protein  44.39 
 
 
207 aa  156  2e-37  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4852  LuxR family transcriptional regulator  43.9 
 
 
207 aa  150  8.999999999999999e-36  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0262091 
 
 
-
 
NC_013093  Amir_2952  transcriptional regulator, LuxR family  43.4 
 
 
207 aa  127  1.0000000000000001e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0281323  n/a   
 
 
-
 
NC_013131  Caci_4395  transcriptional regulator, LuxR family  45.41 
 
 
208 aa  121  8e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0350  LuxR family transcriptional regulator  42.23 
 
 
202 aa  117  1.9999999999999998e-25  Salinispora arenicola CNS-205  Bacteria  normal  0.204823  normal  0.0810275 
 
 
-
 
NC_009921  Franean1_3808  LuxR family transcriptional regulator  45.18 
 
 
268 aa  110  2.0000000000000002e-23  Frankia sp. EAN1pec  Bacteria  normal  0.0706178  normal  0.229787 
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  29.81 
 
 
232 aa  91.7  8e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2886  transcriptional regulator, LuxR family  33.77 
 
 
252 aa  90.9  1e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.197544  normal  0.152863 
 
 
-
 
NC_013093  Amir_3574  transcriptional regulator, LuxR family  40.87 
 
 
206 aa  81.3  0.00000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0351  LuxR family transcriptional regulator  36.99 
 
 
195 aa  76.6  0.0000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.147651  normal  0.0771656 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  36.23 
 
 
234 aa  76.3  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  30.14 
 
 
210 aa  76.3  0.0000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  42.73 
 
 
228 aa  75.9  0.0000000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  29.81 
 
 
210 aa  75.1  0.0000000000007  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  29.81 
 
 
210 aa  75.1  0.0000000000007  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  29.81 
 
 
210 aa  75.1  0.0000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  29.81 
 
 
210 aa  75.1  0.0000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  29.81 
 
 
210 aa  75.1  0.0000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  29.81 
 
 
210 aa  75.1  0.0000000000007  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  31 
 
 
219 aa  74.7  0.0000000000008  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  29.33 
 
 
210 aa  74.3  0.000000000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  29.81 
 
 
210 aa  73.6  0.000000000002  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  33.58 
 
 
217 aa  73.6  0.000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  29.33 
 
 
210 aa  73.2  0.000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  31.33 
 
 
217 aa  72.8  0.000000000003  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  37.27 
 
 
214 aa  72.4  0.000000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_013093  Amir_3573  transcriptional regulator, LuxR family  36.5 
 
 
189 aa  72  0.000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  29.33 
 
 
210 aa  71.6  0.000000000007  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  30.28 
 
 
215 aa  71.6  0.000000000007  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  27.96 
 
 
226 aa  70.5  0.00000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  33.57 
 
 
213 aa  69.3  0.00000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  31.17 
 
 
234 aa  69.7  0.00000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1619  two component LuxR family transcriptional regulator  34.87 
 
 
163 aa  69.7  0.00000000003  Mycobacterium sp. MCS  Bacteria  normal  0.113726  n/a   
 
 
-
 
NC_008705  Mkms_1644  two component LuxR family transcriptional regulator  34.87 
 
 
163 aa  69.7  0.00000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1592  two component LuxR family transcriptional regulator  34.87 
 
 
162 aa  69.7  0.00000000003  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  31.61 
 
 
220 aa  68.9  0.00000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  27.52 
 
 
213 aa  68.6  0.00000000006  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  34.21 
 
 
221 aa  68.6  0.00000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  31.11 
 
 
227 aa  68.2  0.00000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  29.52 
 
 
220 aa  68.2  0.00000000008  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  31.31 
 
 
239 aa  68.2  0.00000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  34.91 
 
 
231 aa  67.8  0.0000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  28.24 
 
 
208 aa  67.8  0.0000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.64 
 
 
216 aa  67.8  0.0000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  33.93 
 
 
219 aa  66.6  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  36.61 
 
 
211 aa  66.6  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  34.85 
 
 
218 aa  66.6  0.0000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.91 
 
 
216 aa  66.2  0.0000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  34.78 
 
 
226 aa  65.9  0.0000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  33.64 
 
 
221 aa  65.9  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  32.13 
 
 
225 aa  65.5  0.0000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  36.75 
 
 
218 aa  65.5  0.0000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  27.32 
 
 
227 aa  65.5  0.0000000006  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  25.81 
 
 
208 aa  65.5  0.0000000006  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  30.8 
 
 
226 aa  65.1  0.0000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  33.59 
 
 
218 aa  65.1  0.0000000007  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  33.09 
 
 
217 aa  65.1  0.0000000007  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  30.28 
 
 
218 aa  65.1  0.0000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  28.51 
 
 
218 aa  64.7  0.0000000009  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_6284  two component transcriptional regulator, LuxR family  32.05 
 
 
217 aa  64.7  0.0000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  34.21 
 
 
220 aa  64.7  0.0000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  28.51 
 
 
222 aa  64.3  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  33.33 
 
 
222 aa  64.7  0.000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_010678  Rpic_4751  two component transcriptional regulator, LuxR family  35.45 
 
 
211 aa  63.5  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  normal  0.558956 
 
 
-
 
NC_012857  Rpic12D_3674  two component transcriptional regulator, LuxR family  35.45 
 
 
211 aa  63.5  0.000000002  Ralstonia pickettii 12D  Bacteria  normal  0.0912957  normal 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  31.82 
 
 
221 aa  63.5  0.000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.9 
 
 
258 aa  63.9  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  32.06 
 
 
219 aa  63.9  0.000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  38.39 
 
 
219 aa  63.9  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  34.78 
 
 
228 aa  63.9  0.000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  30 
 
 
221 aa  63.9  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  37.84 
 
 
218 aa  62.8  0.000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  37.61 
 
 
216 aa  63.2  0.000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  31.78 
 
 
225 aa  62.8  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  37.84 
 
 
216 aa  62.8  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  29.95 
 
 
213 aa  63.2  0.000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  31.54 
 
 
215 aa  62.4  0.000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  21.76 
 
 
216 aa  62.4  0.000000005  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  31.08 
 
 
228 aa  62.4  0.000000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  30.94 
 
 
220 aa  62.4  0.000000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  35.78 
 
 
207 aa  62.4  0.000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  35.14 
 
 
225 aa  62.4  0.000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  34.23 
 
 
219 aa  62  0.000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  28.1 
 
 
221 aa  62  0.000000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  33.76 
 
 
241 aa  61.6  0.000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.71 
 
 
221 aa  62  0.000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  27 
 
 
219 aa  61.6  0.000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  32.24 
 
 
206 aa  61.6  0.000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  35.78 
 
 
217 aa  61.6  0.000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  30.56 
 
 
219 aa  61.6  0.000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  32.39 
 
 
234 aa  61.6  0.000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.33 
 
 
224 aa  61.6  0.000000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  36.7 
 
 
222 aa  61.6  0.000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  35.48 
 
 
215 aa  60.8  0.00000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  35.48 
 
 
215 aa  60.8  0.00000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  35.48 
 
 
215 aa  60.8  0.00000001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
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