More than 300 homologs were found in PanDaTox collection
for query gene Ppro_2062 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_2062  response regulator receiver protein  100 
 
 
217 aa  445  1.0000000000000001e-124  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  59.79 
 
 
204 aa  256  2e-67  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000726536 
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  58.76 
 
 
204 aa  254  6e-67  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0799  response regulator receiver protein  46.27 
 
 
225 aa  194  9e-49  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0846  response regulator receiver protein  45.59 
 
 
225 aa  194  1e-48  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  50.26 
 
 
202 aa  193  2e-48  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  48.7 
 
 
200 aa  191  8e-48  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  42.44 
 
 
227 aa  169  2e-41  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  57.04 
 
 
308 aa  160  2e-38  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  48.72 
 
 
349 aa  150  1e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  44.97 
 
 
383 aa  147  9e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  40.89 
 
 
353 aa  147  9e-35  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  48.65 
 
 
383 aa  147  1.0000000000000001e-34  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  51.16 
 
 
322 aa  145  3e-34  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  50.64 
 
 
308 aa  144  1e-33  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  41.49 
 
 
363 aa  142  4e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  51.82 
 
 
383 aa  142  5e-33  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  48.3 
 
 
367 aa  141  6e-33  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  54.1 
 
 
339 aa  141  7e-33  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  54.62 
 
 
379 aa  141  9e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  54.92 
 
 
338 aa  140  1.9999999999999998e-32  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  48.82 
 
 
322 aa  140  1.9999999999999998e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  48.68 
 
 
339 aa  139  1.9999999999999998e-32  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  54.92 
 
 
338 aa  140  1.9999999999999998e-32  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  54.92 
 
 
338 aa  140  1.9999999999999998e-32  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  54.92 
 
 
338 aa  140  1.9999999999999998e-32  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  51.16 
 
 
359 aa  140  1.9999999999999998e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  49.3 
 
 
360 aa  139  3e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  52.48 
 
 
365 aa  139  3e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  49.31 
 
 
340 aa  139  3.9999999999999997e-32  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  50.72 
 
 
331 aa  139  3.9999999999999997e-32  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  55.04 
 
 
395 aa  139  4.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  51.64 
 
 
337 aa  138  4.999999999999999e-32  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  46.85 
 
 
374 aa  138  6e-32  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  46.85 
 
 
374 aa  138  6e-32  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  44.52 
 
 
384 aa  137  7.999999999999999e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  49.31 
 
 
338 aa  137  8.999999999999999e-32  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  52.94 
 
 
328 aa  137  1e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  49.35 
 
 
310 aa  136  2e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  51.06 
 
 
488 aa  136  2e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  50 
 
 
319 aa  137  2e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  49.31 
 
 
338 aa  136  2e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  49.31 
 
 
338 aa  136  2e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  49.31 
 
 
338 aa  136  2e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  47.17 
 
 
347 aa  135  3.0000000000000003e-31  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  54.1 
 
 
331 aa  136  3.0000000000000003e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  50.37 
 
 
377 aa  135  4e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  53.03 
 
 
377 aa  135  4e-31  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  47.73 
 
 
369 aa  135  4e-31  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  47.14 
 
 
348 aa  135  5e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  47.14 
 
 
348 aa  135  6.0000000000000005e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  53.79 
 
 
395 aa  135  7.000000000000001e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  51.2 
 
 
350 aa  134  8e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  53.03 
 
 
377 aa  134  9.999999999999999e-31  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_004347  SO_4003  response regulator  43.75 
 
 
357 aa  134  9.999999999999999e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  46.48 
 
 
348 aa  134  9.999999999999999e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  46.88 
 
 
300 aa  134  9.999999999999999e-31  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  47.92 
 
 
353 aa  134  9.999999999999999e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  48.21 
 
 
1691 aa  134  9.999999999999999e-31  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  47.92 
 
 
339 aa  133  1.9999999999999998e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  51.52 
 
 
346 aa  133  1.9999999999999998e-30  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  41.67 
 
 
384 aa  132  3e-30  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  42.78 
 
 
365 aa  132  3.9999999999999996e-30  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  42.21 
 
 
305 aa  132  5e-30  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  51.52 
 
 
375 aa  132  6e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  45.59 
 
 
370 aa  131  6.999999999999999e-30  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  41.79 
 
 
391 aa  131  6.999999999999999e-30  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_012560  Avin_29300  Response regulator  46.31 
 
 
310 aa  131  6.999999999999999e-30  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  40.4 
 
 
314 aa  131  7.999999999999999e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  45.27 
 
 
383 aa  131  9e-30  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  49.64 
 
 
333 aa  131  9e-30  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  39 
 
 
376 aa  131  9e-30  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  48.53 
 
 
343 aa  130  1.0000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008576  Mmc1_2304  response regulator receiver protein  46.77 
 
 
150 aa  130  1.0000000000000001e-29  Magnetococcus sp. MC-1  Bacteria  normal  0.0766818  normal  0.411617 
 
 
-
 
NC_013512  Sdel_0912  metal-dependent phosphohydrolase HD sub domain protein  38.83 
 
 
371 aa  130  2.0000000000000002e-29  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1771  PAS:GGDEF  48.59 
 
 
449 aa  129  2.0000000000000002e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  47.79 
 
 
338 aa  130  2.0000000000000002e-29  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3005  response regulator receiver  52.27 
 
 
361 aa  129  3e-29  Dechloromonas aromatica RCB  Bacteria  normal  0.931132  normal 
 
 
-
 
NC_002977  MCA3081  sensory box protein/response regulator  47.68 
 
 
710 aa  129  4.0000000000000003e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.789878  n/a   
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  51.2 
 
 
302 aa  129  4.0000000000000003e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  45.83 
 
 
395 aa  128  5.0000000000000004e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  46.58 
 
 
363 aa  128  5.0000000000000004e-29  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  48.41 
 
 
316 aa  128  6e-29  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  47.29 
 
 
301 aa  128  6e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153071 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  50.43 
 
 
328 aa  127  1.0000000000000001e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  46.15 
 
 
305 aa  126  2.0000000000000002e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3702  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  52.85 
 
 
863 aa  127  2.0000000000000002e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.170309 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  48.63 
 
 
322 aa  127  2.0000000000000002e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  45.14 
 
 
440 aa  127  2.0000000000000002e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_008576  Mmc1_2528  response regulator receiver protein  50 
 
 
378 aa  127  2.0000000000000002e-28  Magnetococcus sp. MC-1  Bacteria  normal  0.249668  normal  0.0734484 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  45.45 
 
 
363 aa  126  3e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  45.33 
 
 
566 aa  126  3e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  44.6 
 
 
331 aa  126  3e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  43.31 
 
 
315 aa  126  3e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2429  response regulator receiver modulated metal dependent phosphohydrolase  48.94 
 
 
480 aa  126  3e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.129673 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  50 
 
 
358 aa  125  4.0000000000000003e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1561  response regulator receiver modulated diguanylate cyclase  49.61 
 
 
455 aa  125  4.0000000000000003e-28  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000734361  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  44.93 
 
 
331 aa  125  4.0000000000000003e-28  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  44.93 
 
 
331 aa  125  4.0000000000000003e-28  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  45.71 
 
 
715 aa  125  5e-28  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
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